Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:92264433-92865981

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55 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cplaq9 6 38669625 to 92607450 53937825 QTL circadian period of locomotor activity 9
Arrd1 6 75544356 to 92607450 17063094 QTL age-related retinal degeneration 1
Idd20 6 92039950 to 92716697 676747 QTL insulin dependent diabetes susceptibility 20
Gm30688 6 92269224 to 92315813 46589 + lncRNA gene predicted gene, 30688
Gm44803 6 92271417 to 92271572 155 - pseudogene predicted gene 44803
Gm44024 6 92280918 to 92281393 475 - pseudogene predicted gene, 44024
Tssr57790 6 92306105 to 92306113 8 + TSS region transcription start site region 57790
Prickle2 6 92370908 to 92706155 335247 - protein coding gene prickle planar cell polarity protein 2
Cpgi17750 6 92376072 to 92376642 570 CpG island CpG island 17750
Gm38862 6 92403581 to 92422323 18742 + lncRNA gene predicted gene, 38862
Tssr62114 6 92418055 to 92418058 3 - TSS region transcription start site region 62114
Gm38861 6 92422455 to 92424686 2231 + lncRNA gene predicted gene, 38861
Tssr62115 6 92427261 to 92427264 3 - TSS region transcription start site region 62115
Tssr57791 6 92449187 to 92449197 10 + TSS region transcription start site region 57791
Tssr62116 6 92450047 to 92450061 14 - TSS region transcription start site region 62116
Tssr62117 6 92480975 to 92480992 17 - TSS region transcription start site region 62117
Tssr62118 6 92481164 to 92481214 50 - TSS region transcription start site region 62118
Tssr62119 6 92481343 to 92481405 62 - TSS region transcription start site region 62119
Tssr62120 6 92481642 to 92481646 4 - TSS region transcription start site region 62120
Tssr62121 6 92534835 to 92534850 15 - TSS region transcription start site region 62121
Tssr62122 6 92534855 to 92534890 35 - TSS region transcription start site region 62122
Tssr62123 6 92534902 to 92534913 11 - TSS region transcription start site region 62123
Gm17797 6 92561777 to 92562773 996 + pseudogene predicted gene, 17797
Gm5880 6 92564433 to 92565981 1548 - pseudogene predicted gene 5880
Tssr62124 6 92565602 to 92565640 38 - TSS region transcription start site region 62124
Tssr62125 6 92578499 to 92578503 4 - TSS region transcription start site region 62125
Sluc45 6 92607306 to 98258933 5651627 QTL susceptibility to lung cancer 45
Pfat5 6 92607306 to 92607450 144 QTL predicted fat percentage 5
D6Mit284 6 92607306 to 92607450 144 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 284
Tssr62126 6 92640787 to 92640800 13 - TSS region transcription start site region 62126
Tssr62127 6 92642343 to 92642347 4 - TSS region transcription start site region 62127
Tssr62128 6 92673468 to 92673471 3 - TSS region transcription start site region 62128
Tssr62129 6 92677853 to 92677856 3 - TSS region transcription start site region 62129
Cpgi17751 6 92705782 to 92706416 634 CpG island CpG island 17751
Tssr62130 6 92706173 to 92706234 61 - TSS region transcription start site region 62130
Tssr62131 6 92706237 to 92706296 59 - TSS region transcription start site region 62131
D6Mit31.2 6 92716403 to 92716531 128 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 31.2
D6Mit31 6 92716503 to 92716697 194 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 31
Cypr4 6 92716503 to 92716697 194 QTL cytokine production 4
Adamts9 6 92772699 to 92943492 170793 - protein coding gene a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 9
Tssr62132 6 92773333 to 92773338 5 - TSS region transcription start site region 62132
Tssr57792 6 92816433 to 92816455 22 + TSS region transcription start site region 57792
Tssr57793 6 92816460 to 92816483 23 + TSS region transcription start site region 57793
Tssr57794 6 92816489 to 92816498 9 + TSS region transcription start site region 57794
A730049H05Rik 6 92816578 to 92847176 30598 + protein coding gene RIKEN cDNA A730049H05 gene
Tssr62133 6 92816636 to 92816655 19 - TSS region transcription start site region 62133
Tssr57795 6 92827634 to 92827663 29 + TSS region transcription start site region 57795
Tssr57796 6 92827672 to 92827685 13 + TSS region transcription start site region 57796
Tssr57797 6 92827725 to 92827747 22 + TSS region transcription start site region 57797
Tssr57798 6 92827779 to 92827790 11 + TSS region transcription start site region 57798
Tssr62134 6 92857026 to 92857031 5 - TSS region transcription start site region 62134
Tssr62135 6 92860431 to 92860447 16 - TSS region transcription start site region 62135
Tssr62136 6 92860494 to 92860509 15 - TSS region transcription start site region 62136
Obrq1 6 112004738 to 92607306 -19397432 QTL obesity resistance QTL 1
Bmiq4 6 146429238 to 92607306 -53821932 QTL body mass index QTL 4