Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:92201072-92551642

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rbsn 6 92186712 to 92214904 28192 - protein coding gene rabenosyn, RAB effector
Cpgi17748 6 92214050 to 92215115 1065 CpG island CpG island 17748
Tssr62106 6 92214843 to 92214877 34 - TSS region transcription start site region 62106
Tssr62107 6 92214897 to 92214906 9 - TSS region transcription start site region 62107
D6Mit362.1 6 92236417 to 92236579 162 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 362.1
D6Mit362 6 92236561 to 92236675 114 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 362
Trh 6 92242061 to 92244650 2589 - protein coding gene thyrotropin releasing hormone
Tssr62108 6 92242461 to 92242472 11 - TSS region transcription start site region 62108
Tssr62109 6 92242672 to 92242708 36 - TSS region transcription start site region 62109
Tssr62110 6 92242741 to 92242757 16 - TSS region transcription start site region 62110
Tssr62111 6 92242891 to 92242905 14 - TSS region transcription start site region 62111
Cpgi17749 6 92244292 to 92245001 709 CpG island CpG island 17749
Tssr62112 6 92244645 to 92244649 4 - TSS region transcription start site region 62112
Tssr62113 6 92246380 to 92246416 36 - TSS region transcription start site region 62113
Gm30688 6 92269224 to 92315813 46589 + lncRNA gene predicted gene, 30688
Gm44803 6 92271417 to 92271572 155 - pseudogene predicted gene 44803
Gm44024 6 92280918 to 92281393 475 - pseudogene predicted gene, 44024
Tssr57790 6 92306105 to 92306113 8 + TSS region transcription start site region 57790
Prickle2 6 92370908 to 92706155 335247 - protein coding gene prickle planar cell polarity protein 2
Cpgi17750 6 92376072 to 92376642 570 CpG island CpG island 17750
Gm38862 6 92403581 to 92422323 18742 + lncRNA gene predicted gene, 38862
Tssr62114 6 92418055 to 92418058 3 - TSS region transcription start site region 62114
Gm38861 6 92422455 to 92424686 2231 + lncRNA gene predicted gene, 38861
Tssr62115 6 92427261 to 92427264 3 - TSS region transcription start site region 62115
Tssr57791 6 92449187 to 92449197 10 + TSS region transcription start site region 57791
Tssr62116 6 92450047 to 92450061 14 - TSS region transcription start site region 62116
Tssr62117 6 92480975 to 92480992 17 - TSS region transcription start site region 62117
Tssr62118 6 92481164 to 92481214 50 - TSS region transcription start site region 62118
Tssr62119 6 92481343 to 92481405 62 - TSS region transcription start site region 62119
Tssr62120 6 92481642 to 92481646 4 - TSS region transcription start site region 62120
Tssr62121 6 92534835 to 92534850 15 - TSS region transcription start site region 62121
Tssr62122 6 92534855 to 92534890 35 - TSS region transcription start site region 62122
Tssr62123 6 92534902 to 92534913 11 - TSS region transcription start site region 62123