Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:92071849-92201853

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fgd5 6 91978878 to 92076004 97126 + protein coding gene FYVE, RhoGEF and PH domain containing 5
Cpgi17746 6 92090832 to 92092602 1770 CpG island CpG island 17746
Tssr57778 6 92091378 to 92091389 11 + TSS region transcription start site region 57778
Tssr57779 6 92091405 to 92091423 18 + TSS region transcription start site region 57779
Nr2c2 6 92091418 to 92173058 81640 + protein coding gene nuclear receptor subfamily 2, group C, member 2
Tssr57780 6 92091436 to 92091466 30 + TSS region transcription start site region 57780
Tssr57781 6 92091495 to 92091506 11 + TSS region transcription start site region 57781
Tssr57782 6 92091512 to 92091523 11 + TSS region transcription start site region 57782
Tssr57783 6 92091528 to 92091537 9 + TSS region transcription start site region 57783
Tssr57784 6 92091546 to 92091557 11 + TSS region transcription start site region 57784
Tssr57785 6 92092328 to 92092334 6 + TSS region transcription start site region 57785
Tssr57786 6 92092369 to 92092419 50 + TSS region transcription start site region 57786
Tssr57787 6 92103658 to 92103662 4 + TSS region transcription start site region 57787
Tssr57788 6 92136849 to 92136853 4 + TSS region transcription start site region 57788
Gm44249 6 92144489 to 92146293 1804 - unclassified gene predicted gene, 44249
Gm46967 6 92151011 to 92157410 6399 - lncRNA gene predicted gene, 46967
Tssr57789 6 92156978 to 92156982 4 + TSS region transcription start site region 57789
9430019H13Rik 6 92165991 to 92167015 1024 unclassified gene RIKEN cDNA 9430019H13 gene
Mrps25 6 92169525 to 92184033 14508 - protein coding gene mitochondrial ribosomal protein S25
Tssr62104 6 92177452 to 92177456 4 - TSS region transcription start site region 62104
Cpgi17747 6 92183532 to 92184275 743 CpG island CpG island 17747
Tssr62105 6 92183972 to 92184038 66 - TSS region transcription start site region 62105
Rbsn 6 92186712 to 92214904 28192 - protein coding gene rabenosyn, RAB effector