Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:91727809-92028569

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60 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc6a6 6 91684053 to 91759066 75013 + protein coding gene solute carrier family 6 (neurotransmitter transporter, taurine), member 6
Tssr57743 6 91734854 to 91734860 6 + TSS region transcription start site region 57743
Tssr57744 6 91739170 to 91739181 11 + TSS region transcription start site region 57744
Tssr57745 6 91739227 to 91739231 4 + TSS region transcription start site region 57745
Tssr57746 6 91754969 to 91754980 11 + TSS region transcription start site region 57746
Tssr57747 6 91755158 to 91755174 16 + TSS region transcription start site region 57747
Tssr62094 6 91755231 to 91755237 6 - TSS region transcription start site region 62094
Tssr57748 6 91755997 to 91756017 20 + TSS region transcription start site region 57748
Tssr57749 6 91756143 to 91756157 14 + TSS region transcription start site region 57749
Tssr57750 6 91756493 to 91756520 27 + TSS region transcription start site region 57750
Tssr57751 6 91756594 to 91756624 30 + TSS region transcription start site region 57751
Tssr57752 6 91756983 to 91756994 11 + TSS region transcription start site region 57752
Tssr1939 6 91757117 to 91757122 5 + TSS region transcription start site region 1939
Tssr57753 6 91757819 to 91757829 10 + TSS region transcription start site region 57753
Tssr57754 6 91757918 to 91757925 7 + TSS region transcription start site region 57754
Tssr57755 6 91758009 to 91758021 12 + TSS region transcription start site region 57755
Tssr57756 6 91758042 to 91758061 19 + TSS region transcription start site region 57756
Tssr57757 6 91758079 to 91758086 7 + TSS region transcription start site region 57757
Tssr57758 6 91758110 to 91758122 12 + TSS region transcription start site region 57758
Tssr62095 6 91758326 to 91758352 26 - TSS region transcription start site region 62095
Tssr57759 6 91758335 to 91758346 11 + TSS region transcription start site region 57759
Tssr57760 6 91758391 to 91758402 11 + TSS region transcription start site region 57760
Tssr57761 6 91758408 to 91758419 11 + TSS region transcription start site region 57761
Tssr57762 6 91758436 to 91758460 24 + TSS region transcription start site region 57762
Tssr57763 6 91758463 to 91758484 21 + TSS region transcription start site region 57763
Tssr57764 6 91758488 to 91758508 20 + TSS region transcription start site region 57764
Tssr57765 6 91758528 to 91758541 13 + TSS region transcription start site region 57765
Tssr57766 6 91758550 to 91758567 17 + TSS region transcription start site region 57766
Tssr62096 6 91758601 to 91758634 33 - TSS region transcription start site region 62096
Tssr57767 6 91758617 to 91758638 21 + TSS region transcription start site region 57767
Tssr57768 6 91758640 to 91758648 8 + TSS region transcription start site region 57768
Tssr62097 6 91758816 to 91758841 25 - TSS region transcription start site region 62097
Tssr57769 6 91758832 to 91758848 16 + TSS region transcription start site region 57769
Tssr57770 6 91758939 to 91758959 20 + TSS region transcription start site region 57770
Grip2 6 91761509 to 91827250 65741 - protein coding gene glutamate receptor interacting protein 2
Tssr62098 6 91796241 to 91796249 8 - TSS region transcription start site region 62098
Tssr62099 6 91796250 to 91796266 16 - TSS region transcription start site region 62099
Cpgi17742 6 91807198 to 91807539 341 CpG island CpG island 17742
Tssr62100 6 91807390 to 91807411 21 - TSS region transcription start site region 62100
Tssr62101 6 91807424 to 91807456 32 - TSS region transcription start site region 62101
Cpgi17743 6 91843056 to 91844203 1147 CpG island CpG island 17743
Tssr62102 6 91843876 to 91843915 39 - TSS region transcription start site region 62102
Gm44712 6 91876910 to 91877985 1075 - unclassified gene predicted gene 44712
Cpgi17744 6 91877809 to 91878569 760 CpG island CpG island 17744
Tssr57771 6 91878034 to 91878089 55 + TSS region transcription start site region 57771
Ccdc174 6 91878053 to 91899843 21790 + protein coding gene coiled-coil domain containing 174
4930590J08Rik 6 91902809 to 91950725 47916 + protein coding gene RIKEN cDNA 4930590J08 gene
Tssr57772 6 91904212 to 91904273 61 + TSS region transcription start site region 57772
Tssr57773 6 91904276 to 91904281 5 + TSS region transcription start site region 57773
Gm44711 6 91938250 to 91939513 1263 - unclassified gene predicted gene 44711
Tssr57774 6 91939001 to 91939003 2 + TSS region transcription start site region 57774
Cpgi17745 6 91978405 to 91979650 1245 CpG island CpG island 17745
Tssr57775 6 91978851 to 91978913 62 + TSS region transcription start site region 57775
Fgd5 6 91978878 to 92076004 97126 + protein coding gene FYVE, RhoGEF and PH domain containing 5
Tssr57776 6 91978957 to 91978983 26 + TSS region transcription start site region 57776
Tssr57777 6 91983367 to 91983370 3 + TSS region transcription start site region 57777
Gm44095 6 92007550 to 92009480 1930 + unclassified gene predicted gene, 44095
Opfdc1 6 92012313 to 92012313 0 QTL open field distance from center 1
4930466I24Rik 6 92012394 to 92016117 3723 - antisense lncRNA gene RIKEN cDNA 4930466I24 gene
Tssr62103 6 92026448 to 92026450 2 - TSS region transcription start site region 62103