Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:91412017-91742206

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68 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi17736 6 91409773 to 91412227 2454 CpG island CpG island 17736
Gm30437 6 91411540 to 91412716 1176 + lncRNA gene predicted gene, 30437
Vmn1r-ps35 6 91428272 to 91428806 534 - pseudogene vomeronasal 1 receptor, pseudogene 35
Gm4575 6 91428883 to 91429884 1001 + pseudogene predicted gene 4575
Vmn1r-ps36 6 91430083 to 91430484 401 - pseudogene vomeronasal 1 receptor, pseudogene 36
4930471M09Rik 6 91430460 to 91440854 10394 - lincRNA gene RIKEN cDNA 4930471M09 gene
Cpgi17737 6 91440724 to 91441675 951 CpG island CpG island 17737
Tssr62079 6 91440867 to 91440919 52 - TSS region transcription start site region 62079
Tssr57722 6 91440964 to 91441028 64 + TSS region transcription start site region 57722
1810044D09Rik 6 91440987 to 91441755 768 + lincRNA gene RIKEN cDNA 1810044D09 gene
Gm44629 6 91445027 to 91446866 1839 - pseudogene predicted gene 44629
Chchd4 6 91464276 to 91473423 9147 - protein coding gene coiled-coil-helix-coiled-coil-helix domain containing 4
Cpgi17738 6 91472861 to 91474248 1387 CpG island CpG island 17738
Tssr62080 6 91473361 to 91473470 109 - TSS region transcription start site region 62080
Tssr62081 6 91473504 to 91473552 48 - TSS region transcription start site region 62081
Tssr57723 6 91473695 to 91473787 92 + TSS region transcription start site region 57723
Tmem43 6 91473751 to 91488458 14707 + protein coding gene transmembrane protein 43
Tssr57724 6 91476772 to 91476802 30 + TSS region transcription start site region 57724
Xpc 6 91489305 to 91515888 26583 - protein coding gene xeroderma pigmentosum, complementation group C
Tssr62082 6 91490017 to 91490030 13 - TSS region transcription start site region 62082
Tssr62083 6 91491080 to 91491086 6 - TSS region transcription start site region 62083
Tssr62084 6 91493137 to 91493162 25 - TSS region transcription start site region 62084
Tssr62085 6 91493164 to 91493181 17 - TSS region transcription start site region 62085
Tssr62086 6 91493184 to 91493213 29 - TSS region transcription start site region 62086
Tssr62087 6 91493231 to 91493248 17 - TSS region transcription start site region 62087
Cpgi17739 6 91515281 to 91516435 1154 CpG island CpG island 17739
Tssr62088 6 91515796 to 91515859 63 - TSS region transcription start site region 62088
Tssr62089 6 91515878 to 91515889 11 - TSS region transcription start site region 62089
Tssr57725 6 91515969 to 91515993 24 + TSS region transcription start site region 57725
Tssr57726 6 91516006 to 91516058 52 + TSS region transcription start site region 57726
Lsm3 6 91516035 to 91522620 6585 + protein coding gene LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated
Gm45216 6 91522409 to 91532379 9970 + sense overlapping lncRNA gene predicted gene 45216
D6Mit1005 6 91550615 to 91550724 109 DNA segment DNA Segment, Chr 6, Massachusetts Institute of Technology 1005
Cpgi17740 6 91577017 to 91577206 189 CpG island CpG island 17740
Gm45215 6 91594758 to 91595152 394 + pseudogene predicted gene 45215
Gm45218 6 91599232 to 91605514 6282 + lincRNA gene predicted gene 45218
Gm40387 6 91660736 to 91679676 18940 + lncRNA gene predicted gene, 40387
Gm30628 6 91663408 to 91679617 16209 - lncRNA gene predicted gene, 30628
Tssr62090 6 91668502 to 91668521 19 - TSS region transcription start site region 62090
Tssr62091 6 91668537 to 91668545 8 - TSS region transcription start site region 62091
Gm45217 6 91678198 to 91679223 1025 - unclassified gene predicted gene 45217
Tssr57727 6 91683594 to 91683644 50 + TSS region transcription start site region 57727
Cpgi17741 6 91683598 to 91684811 1213 CpG island CpG island 17741
Slc6a6 6 91684053 to 91759066 75013 + protein coding gene solute carrier family 6 (neurotransmitter transporter, taurine), member 6
Tssr57728 6 91684061 to 91684132 71 + TSS region transcription start site region 57728
Tssr57729 6 91684177 to 91684191 14 + TSS region transcription start site region 57729
4930517G19Rik 6 91689933 to 91691608 1675 - unclassified gene RIKEN cDNA 4930517G19 gene
Tssr57730 6 91690393 to 91690440 47 + TSS region transcription start site region 57730
Tssr62092 6 91692726 to 91692727 1 - TSS region transcription start site region 62092
Tssr57731 6 91699109 to 91699121 12 + TSS region transcription start site region 57731
Tssr57732 6 91699138 to 91699155 17 + TSS region transcription start site region 57732
Tssr57733 6 91701649 to 91701662 13 + TSS region transcription start site region 57733
Tssr57734 6 91705804 to 91705832 28 + TSS region transcription start site region 57734
Tssr57735 6 91705850 to 91705879 29 + TSS region transcription start site region 57735
Tssr1938 6 91706257 to 91706267 10 - TSS region transcription start site region 1938
Gm45828 6 91709406 to 91711241 1835 + unclassified gene predicted gene 45828
Tssr57736 6 91709441 to 91709451 10 + TSS region transcription start site region 57736
Gm44981 6 91711336 to 91713278 1942 - unclassified gene predicted gene 44981
Tssr62093 6 91716343 to 91716370 27 - TSS region transcription start site region 62093
Tssr57737 6 91721718 to 91721740 22 + TSS region transcription start site region 57737
Tssr57738 6 91724930 to 91724944 14 + TSS region transcription start site region 57738
Tssr57739 6 91726072 to 91726088 16 + TSS region transcription start site region 57739
Tssr57740 6 91726110 to 91726132 22 + TSS region transcription start site region 57740
Tssr57741 6 91726184 to 91726206 22 + TSS region transcription start site region 57741
Tssr57742 6 91726207 to 91726229 22 + TSS region transcription start site region 57742
Tssr57743 6 91734854 to 91734860 6 + TSS region transcription start site region 57743
Tssr57744 6 91739170 to 91739181 11 + TSS region transcription start site region 57744
Tssr57745 6 91739227 to 91739231 4 + TSS region transcription start site region 57745