Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:91121363-91701373

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95 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm30364 6 91117102 to 91126974 9872 + lncRNA gene predicted gene, 30364
Cpgi17731 6 91156504 to 91157150 646 CpG island CpG island 17731
Hdac11 6 91156670 to 91174692 18022 + protein coding gene histone deacetylase 11
Tssr57697 6 91156715 to 91156738 23 + TSS region transcription start site region 57697
Tssr57698 6 91156740 to 91156765 25 + TSS region transcription start site region 57698
Tssr57699 6 91156772 to 91156827 55 + TSS region transcription start site region 57699
Tssr57700 6 91157083 to 91157099 16 + TSS region transcription start site region 57700
Tssr57701 6 91157251 to 91157262 11 + TSS region transcription start site region 57701
Tssr57702 6 91157373 to 91157391 18 + TSS region transcription start site region 57702
Gm14573 6 91158713 to 91159256 543 - antisense lncRNA gene predicted gene 14573
Gm44002 6 91173425 to 91174018 593 - unclassified gene predicted gene, 44002
4930402H05Rik 6 91207216 to 91210044 2828 - unclassified gene RIKEN cDNA 4930402H05 gene
Cpgi17732 6 91212649 to 91213188 539 CpG island CpG island 17732
Fbln2 6 91212764 to 91272540 59776 + protein coding gene fibulin 2
Tssr57703 6 91212787 to 91212798 11 + TSS region transcription start site region 57703
Tssr57704 6 91212799 to 91212844 45 + TSS region transcription start site region 57704
Tssr57705 6 91212859 to 91212870 11 + TSS region transcription start site region 57705
Cpgi17733 6 91233141 to 91233538 397 CpG island CpG island 17733
Tssr57706 6 91233210 to 91233219 9 + TSS region transcription start site region 57706
Tssr57707 6 91233478 to 91233492 14 + TSS region transcription start site region 57707
Tssr57708 6 91233496 to 91233507 11 + TSS region transcription start site region 57708
Tssr1937 6 91233542 to 91233552 10 + TSS region transcription start site region 1937
Tssr57709 6 91233752 to 91233768 16 + TSS region transcription start site region 57709
Tssr57710 6 91233794 to 91233806 12 + TSS region transcription start site region 57710
Tssr62074 6 91233912 to 91233964 52 - TSS region transcription start site region 62074
Tssr57711 6 91234018 to 91234027 9 + TSS region transcription start site region 57711
Tssr57712 6 91234216 to 91234237 21 + TSS region transcription start site region 57712
Tssr57713 6 91234290 to 91234301 11 + TSS region transcription start site region 57713
Tssr57714 6 91252573 to 91252576 3 + TSS region transcription start site region 57714
Tssr57715 6 91265878 to 91265892 14 + TSS region transcription start site region 57715
Tssr57716 6 91265930 to 91265937 7 + TSS region transcription start site region 57716
Tssr57717 6 91265946 to 91265959 13 + TSS region transcription start site region 57717
Tssr57718 6 91265962 to 91265972 10 + TSS region transcription start site region 57718
Tssr57719 6 91270030 to 91270054 24 + TSS region transcription start site region 57719
Tssr57720 6 91272101 to 91272113 12 + TSS region transcription start site region 57720
Tssr57721 6 91272470 to 91272483 13 + TSS region transcription start site region 57721
Cpgi17734 6 91284995 to 91286450 1455 CpG island CpG island 17734
Gm46986 6 91320565 to 91321035 470 - pseudogene predicted gene, 46986
Tssr62075 6 91321040 to 91321049 9 - TSS region transcription start site region 62075
Wnt7a 6 91363981 to 91411363 47382 - protein coding gene wingless-type MMTV integration site family, member 7A
Cpgi17735 6 91408680 to 91408835 155 CpG island CpG island 17735
Cpgi17736 6 91409773 to 91412227 2454 CpG island CpG island 17736
Tssr62076 6 91411320 to 91411331 11 - TSS region transcription start site region 62076
Tssr62077 6 91411341 to 91411360 19 - TSS region transcription start site region 62077
Tssr62078 6 91411363 to 91411373 10 - TSS region transcription start site region 62078
Gm30437 6 91411540 to 91412716 1176 + lncRNA gene predicted gene, 30437
Vmn1r-ps35 6 91428272 to 91428806 534 - pseudogene vomeronasal 1 receptor, pseudogene 35
Gm4575 6 91428883 to 91429884 1001 + pseudogene predicted gene 4575
Vmn1r-ps36 6 91430083 to 91430484 401 - pseudogene vomeronasal 1 receptor, pseudogene 36
4930471M09Rik 6 91430460 to 91440854 10394 - lincRNA gene RIKEN cDNA 4930471M09 gene
Cpgi17737 6 91440724 to 91441675 951 CpG island CpG island 17737
Tssr62079 6 91440867 to 91440919 52 - TSS region transcription start site region 62079
Tssr57722 6 91440964 to 91441028 64 + TSS region transcription start site region 57722
1810044D09Rik 6 91440987 to 91441755 768 + lincRNA gene RIKEN cDNA 1810044D09 gene
Gm44629 6 91445027 to 91446866 1839 - pseudogene predicted gene 44629
Chchd4 6 91464276 to 91473423 9147 - protein coding gene coiled-coil-helix-coiled-coil-helix domain containing 4
Cpgi17738 6 91472861 to 91474248 1387 CpG island CpG island 17738
Tssr62080 6 91473361 to 91473470 109 - TSS region transcription start site region 62080
Tssr62081 6 91473504 to 91473552 48 - TSS region transcription start site region 62081
Tssr57723 6 91473695 to 91473787 92 + TSS region transcription start site region 57723
Tmem43 6 91473751 to 91488458 14707 + protein coding gene transmembrane protein 43
Tssr57724 6 91476772 to 91476802 30 + TSS region transcription start site region 57724
Xpc 6 91489305 to 91515888 26583 - protein coding gene xeroderma pigmentosum, complementation group C
Tssr62082 6 91490017 to 91490030 13 - TSS region transcription start site region 62082
Tssr62083 6 91491080 to 91491086 6 - TSS region transcription start site region 62083
Tssr62084 6 91493137 to 91493162 25 - TSS region transcription start site region 62084
Tssr62085 6 91493164 to 91493181 17 - TSS region transcription start site region 62085
Tssr62086 6 91493184 to 91493213 29 - TSS region transcription start site region 62086
Tssr62087 6 91493231 to 91493248 17 - TSS region transcription start site region 62087
Cpgi17739 6 91515281 to 91516435 1154 CpG island CpG island 17739
Tssr62088 6 91515796 to 91515859 63 - TSS region transcription start site region 62088
Tssr62089 6 91515878 to 91515889 11 - TSS region transcription start site region 62089
Tssr57725 6 91515969 to 91515993 24 + TSS region transcription start site region 57725
Tssr57726 6 91516006 to 91516058 52 + TSS region transcription start site region 57726
Lsm3 6 91516035 to 91522620 6585 + protein coding gene LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated
Gm45216 6 91522409 to 91532379 9970 + sense overlapping lncRNA gene predicted gene 45216
D6Mit1005 6 91550615 to 91550724 109 DNA segment DNA Segment, Chr 6, Massachusetts Institute of Technology 1005
Cpgi17740 6 91577017 to 91577206 189 CpG island CpG island 17740
Gm45215 6 91594758 to 91595152 394 + pseudogene predicted gene 45215
Gm45218 6 91599232 to 91605514 6282 + lincRNA gene predicted gene 45218
Gm40387 6 91660736 to 91679676 18940 + lncRNA gene predicted gene, 40387
Gm30628 6 91663408 to 91679617 16209 - lncRNA gene predicted gene, 30628
Tssr62090 6 91668502 to 91668521 19 - TSS region transcription start site region 62090
Tssr62091 6 91668537 to 91668545 8 - TSS region transcription start site region 62091
Gm45217 6 91678198 to 91679223 1025 - unclassified gene predicted gene 45217
Tssr57727 6 91683594 to 91683644 50 + TSS region transcription start site region 57727
Cpgi17741 6 91683598 to 91684811 1213 CpG island CpG island 17741
Slc6a6 6 91684053 to 91759066 75013 + protein coding gene solute carrier family 6 (neurotransmitter transporter, taurine), member 6
Tssr57728 6 91684061 to 91684132 71 + TSS region transcription start site region 57728
Tssr57729 6 91684177 to 91684191 14 + TSS region transcription start site region 57729
4930517G19Rik 6 91689933 to 91691608 1675 - unclassified gene RIKEN cDNA 4930517G19 gene
Tssr57730 6 91690393 to 91690440 47 + TSS region transcription start site region 57730
Tssr62092 6 91692726 to 91692727 1 - TSS region transcription start site region 62092
Tssr57731 6 91699109 to 91699121 12 + TSS region transcription start site region 57731
Tssr57732 6 91699138 to 91699155 17 + TSS region transcription start site region 57732