Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:90616112-90856151

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56 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc41a3 6 90604729 to 90646412 41683 + protein coding gene solute carrier family 41, member 3
Tssr57686 6 90618478 to 90618510 32 + TSS region transcription start site region 57686
Tssr57687 6 90619101 to 90619115 14 + TSS region transcription start site region 57687
Tssr57688 6 90619144 to 90619158 14 + TSS region transcription start site region 57688
Tssr57689 6 90619169 to 90619186 17 + TSS region transcription start site region 57689
Tssr57690 6 90619222 to 90619233 11 + TSS region transcription start site region 57690
Tssr57691 6 90619241 to 90619255 14 + TSS region transcription start site region 57691
Tssr57692 6 90619351 to 90619363 12 + TSS region transcription start site region 57692
Tssr57693 6 90619365 to 90619382 17 + TSS region transcription start site region 57693
Iqsec1 6 90659596 to 90988458 328862 - protein coding gene IQ motif and Sec7 domain 1
Tssr62023 6 90659866 to 90659872 6 - TSS region transcription start site region 62023
Tssr62024 6 90660334 to 90660336 2 - TSS region transcription start site region 62024
Tssr62025 6 90661752 to 90661770 18 - TSS region transcription start site region 62025
Tssr62026 6 90662053 to 90662064 11 - TSS region transcription start site region 62026
Tssr62027 6 90662099 to 90662119 20 - TSS region transcription start site region 62027
Tssr62028 6 90662170 to 90662220 50 - TSS region transcription start site region 62028
Tssr62029 6 90662249 to 90662270 21 - TSS region transcription start site region 62029
Tssr62030 6 90662725 to 90662763 38 - TSS region transcription start site region 62030
Tssr57694 6 90662808 to 90662829 21 + TSS region transcription start site region 57694
Tssr62031 6 90662868 to 90662885 17 - TSS region transcription start site region 62031
Tssr62032 6 90663050 to 90663061 11 - TSS region transcription start site region 62032
Tssr62033 6 90670469 to 90670495 26 - TSS region transcription start site region 62033
Gm24816 6 90681370 to 90681520 150 - miRNA gene predicted gene, 24816
Gm44123 6 90689731 to 90690829 1098 + antisense lncRNA gene predicted gene, 44123
Tssr62034 6 90689757 to 90689789 32 - TSS region transcription start site region 62034
Cpgi17725 6 90716067 to 90716750 683 CpG island CpG island 17725
Tssr62035 6 90716411 to 90716420 9 - TSS region transcription start site region 62035
Tssr62036 6 90716489 to 90716543 54 - TSS region transcription start site region 62036
Tssr62037 6 90731400 to 90731426 26 - TSS region transcription start site region 62037
Tssr62038 6 90731452 to 90731464 12 - TSS region transcription start site region 62038
Cpgi17726 6 90735638 to 90737500 1862 CpG island CpG island 17726
Tssr62039 6 90736112 to 90736151 39 - TSS region transcription start site region 62039
Tssr62040 6 90736756 to 90736777 21 - TSS region transcription start site region 62040
Tssr62041 6 90736778 to 90736817 39 - TSS region transcription start site region 62041
Tssr62042 6 90754281 to 90754292 11 - TSS region transcription start site region 62042
Tssr1935 6 90754980 to 90754997 17 - TSS region transcription start site region 1935
Tssr62043 6 90756769 to 90756780 11 - TSS region transcription start site region 62043
Tssr62044 6 90757461 to 90757472 11 - TSS region transcription start site region 62044
Tssr62045 6 90757486 to 90757534 48 - TSS region transcription start site region 62045
Tssr62046 6 90763937 to 90763951 14 - TSS region transcription start site region 62046
Cpgi17727 6 90764031 to 90764229 198 CpG island CpG island 17727
Tssr62047 6 90764297 to 90764309 12 - TSS region transcription start site region 62047
Tssr57695 6 90764423 to 90764454 31 + TSS region transcription start site region 57695
E130314K07Rik 6 90777741 to 90782080 4339 unclassified gene RIKEN cDNA E130314K07 gene
Tssr62048 6 90781282 to 90781286 4 - TSS region transcription start site region 62048
Tssr62049 6 90782024 to 90782035 11 - TSS region transcription start site region 62049
Tssr62050 6 90782037 to 90782066 29 - TSS region transcription start site region 62050
Tssr62051 6 90782510 to 90782529 19 - TSS region transcription start site region 62051
Gm44105 6 90793896 to 90794475 579 - sense intronic lncRNA gene predicted gene, 44105
Cpgi17728 6 90809961 to 90810356 395 CpG island CpG island 17728
Tssr62052 6 90810025 to 90810073 48 - TSS region transcription start site region 62052
Tssr62053 6 90810079 to 90810094 15 - TSS region transcription start site region 62053
Tssr62054 6 90810118 to 90810160 42 - TSS region transcription start site region 62054
Tssr62055 6 90810162 to 90810219 57 - TSS region transcription start site region 62055
Rpl21-ps12 6 90844981 to 90845460 479 - pseudogene ribosomal protein L21, pseudogene 12
D6Mit229 6 90846428 to 90846576 148 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 229