Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:90306807-90469357

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Chst13 6 90308351 to 90325185 16834 - protein coding gene carbohydrate sulfotransferase 13
Cpgi17717 6 90308816 to 90310181 1365 CpG island CpG island 17717
Tssr62019 6 90318842 to 90318848 6 - TSS region transcription start site region 62019
Tssr57638 6 90320767 to 90320771 4 + TSS region transcription start site region 57638
Cpgi17718 6 90324884 to 90325375 491 CpG island CpG island 17718
Tssr1932 6 90325177 to 90325203 26 - TSS region transcription start site region 1932
Tssr62020 6 90325214 to 90325227 13 - TSS region transcription start site region 62020
Tssr57639 6 90333270 to 90333306 36 + TSS region transcription start site region 57639
Uroc1 6 90333284 to 90364551 31267 + protein coding gene urocanase domain containing 1
D6Mit131 6 90353901 to 90354039 138 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 131
Tssr57640 6 90363300 to 90363317 17 + TSS region transcription start site region 57640
Tssr57641 6 90363383 to 90363392 9 + TSS region transcription start site region 57641
Tssr57642 6 90363904 to 90363920 16 + TSS region transcription start site region 57642
Tssr57643 6 90364201 to 90364205 4 + TSS region transcription start site region 57643
Cpgi17719 6 90369094 to 90370754 1660 CpG island CpG island 17719
Tssr57644 6 90369486 to 90369657 171 + TSS region transcription start site region 57644
Zxdc 6 90369492 to 90403490 33998 + protein coding gene ZXD family zinc finger C
Tssr57645 6 90384493 to 90384533 40 + TSS region transcription start site region 57645
C030015A19Rik 6 90386807 to 90389357 2550 + unclassified gene RIKEN cDNA C030015A19 gene
Cfap100 6 90403479 to 90428797 25318 - protein coding gene cilia and flagella associated protein 100
Cpgi17720 6 90428378 to 90428890 512 CpG island CpG island 17720
Tssr62021 6 90428401 to 90428455 54 - TSS region transcription start site region 62021
Tssr57646 6 90428520 to 90428565 45 + TSS region transcription start site region 57646
Gm44117 6 90459711 to 90461468 1757 - lincRNA gene predicted gene, 44117
Cpgi17721 6 90461806 to 90463843 2037 CpG island CpG island 17721
Tssr57647 6 90462562 to 90462587 25 + TSS region transcription start site region 57647
Klf15 6 90462576 to 90475238 12662 + protein coding gene Kruppel-like factor 15
Tssr57648 6 90462588 to 90462607 19 + TSS region transcription start site region 57648
Tssr57649 6 90462614 to 90462636 22 + TSS region transcription start site region 57649
Tssr57650 6 90465256 to 90465277 21 + TSS region transcription start site region 57650
Tssr57651 6 90465287 to 90465301 14 + TSS region transcription start site region 57651
Tssr57652 6 90466281 to 90466292 11 + TSS region transcription start site region 57652
Tssr57653 6 90466311 to 90466330 19 + TSS region transcription start site region 57653