MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 6:89295140-89396563

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm26811	6	89304630 to 89327621	22991	+	antisense lncRNA gene	predicted gene, 26811
Plxna1	6	89316313 to 89362613	46300	-	protein coding gene	plexin A1
Tssr62003	6	89316683 to 89316687	4	-	TSS region	transcription start site region 62003
Tssr62004	6	89316749 to 89316766	17	-	TSS region	transcription start site region 62004
Tssr62005	6	89317972 to 89317986	14	-	TSS region	transcription start site region 62005
Gm44207	6	89345140 to 89346563	1423	+	unclassified gene	predicted gene, 44207
Tssr62006	6	89348580 to 89348604	24	-	TSS region	transcription start site region 62006
Tssr62007	6	89357709 to 89357721	12	-	TSS region	transcription start site region 62007
Cpgi17713	6	89361257 to 89363385	2128		CpG island	CpG island 17713
Gm40415	6	89361355 to 89362396	1041	+	protein coding gene	predicted gene, 40415
Tssr62008	6	89362553 to 89362574	21	-	TSS region	transcription start site region 62008
Tssr62009	6	89362581 to 89362637	56	-	TSS region	transcription start site region 62009
Tssr62010	6	89363579 to 89363593	14	-	TSS region	transcription start site region 62010
Tssr62011	6	89364384 to 89364418	34	-	TSS region	transcription start site region 62011
Tssr62012	6	89364495 to 89364509	14	-	TSS region	transcription start site region 62012
Tssr57621	6	89364616 to 89364648	32	+	TSS region	transcription start site region 57621
Chchd6	6	89383146 to 89595652	212506	-	protein coding gene	coiled-coil-helix-coiled-coil-helix domain containing 6
Tssr57622	6	89392101 to 89392140	39	+	TSS region	transcription start site region 57622