MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 6:88305977-88506301

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Eefsec	6	88257334 to 88446539	189205	-	protein coding gene	eukaryotic elongation factor, selenocysteine-tRNA-specific
Gm44265	6	88353142 to 88353606	464	-	sense intronic lncRNA gene	predicted gene, 44265
Tssr61976	6	88373915 to 88373919	4	-	TSS region	transcription start site region 61976
Gm25178	6	88405977 to 88406301	324	+	unclassified non-coding RNA gene	predicted gene, 25178
Gm44264	6	88445687 to 88446513	826	+	antisense lncRNA gene	predicted gene, 44264
Cpgi17699	6	88445921 to 88446857	936		CpG island	CpG island 17699
Tssr61977	6	88446491 to 88446539	48	-	TSS region	transcription start site region 61977
Cpgi17700	6	88465254 to 88465937	683		CpG island	CpG island 17700
Tssr61978	6	88465264 to 88465304	40	-	TSS region	transcription start site region 61978
Tssr57590	6	88465417 to 88465482	65	+	TSS region	transcription start site region 57590
Ruvbl1	6	88465423 to 88497566	32143	+	protein coding gene	RuvB-like protein 1
Tssr57591	6	88465483 to 88465495	12	+	TSS region	transcription start site region 57591
D6Mit226	6	88474359 to 88474505	146		DNA segment	DNA segment, Chr 6, Massachusetts Institute of Technology 226
Gm46965	6	88491625 to 88496401	4776	+	protein coding gene	predicted gene, 46965
Cpgi17701	6	88499385 to 88500656	1271		CpG island	CpG island 17701
Gm44170	6	88503605 to 88504277	672	+	antisense lncRNA gene	predicted gene, 44170
Sec61a1	6	88503607 to 88518800	15193	-	protein coding gene	Sec61 alpha 1 subunit (S. cerevisiae)
Tssr61979	6	88504980 to 88504984	4	-	TSS region	transcription start site region 61979