Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:88254385-88745656

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55 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Eefsec 6 88257334 to 88446539 189205 - protein coding gene eukaryotic elongation factor, selenocysteine-tRNA-specific
Tssr61975 6 88268835 to 88268844 9 - TSS region transcription start site region 61975
Tssr57587 6 88272374 to 88272379 5 + TSS region transcription start site region 57587
Tssr57588 6 88272385 to 88272391 6 + TSS region transcription start site region 57588
Tssr57589 6 88272400 to 88272407 7 + TSS region transcription start site region 57589
Gm44265 6 88353142 to 88353606 464 - sense intronic lncRNA gene predicted gene, 44265
Tssr61976 6 88373915 to 88373919 4 - TSS region transcription start site region 61976
Gm25178 6 88405977 to 88406301 324 + unclassified non-coding RNA gene predicted gene, 25178
Gm44264 6 88445687 to 88446513 826 + antisense lncRNA gene predicted gene, 44264
Cpgi17699 6 88445921 to 88446857 936 CpG island CpG island 17699
Tssr61977 6 88446491 to 88446539 48 - TSS region transcription start site region 61977
Cpgi17700 6 88465254 to 88465937 683 CpG island CpG island 17700
Tssr61978 6 88465264 to 88465304 40 - TSS region transcription start site region 61978
Tssr57590 6 88465417 to 88465482 65 + TSS region transcription start site region 57590
Ruvbl1 6 88465423 to 88497566 32143 + protein coding gene RuvB-like protein 1
Tssr57591 6 88465483 to 88465495 12 + TSS region transcription start site region 57591
D6Mit226 6 88474359 to 88474505 146 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 226
Gm46965 6 88491625 to 88496401 4776 + protein coding gene predicted gene, 46965
Cpgi17701 6 88499385 to 88500656 1271 CpG island CpG island 17701
Gm44170 6 88503605 to 88504277 672 + antisense lncRNA gene predicted gene, 44170
Sec61a1 6 88503607 to 88518800 15193 - protein coding gene Sec61 alpha 1 subunit (S. cerevisiae)
Tssr61979 6 88504980 to 88504984 4 - TSS region transcription start site region 61979
Tssr61980 6 88508613 to 88508647 34 - TSS region transcription start site region 61980
Tssr61981 6 88515408 to 88515426 18 - TSS region transcription start site region 61981
Cpgi17702 6 88518161 to 88519491 1330 CpG island CpG island 17702
Tssr61982 6 88518735 to 88518757 22 - TSS region transcription start site region 61982
Tssr61983 6 88518760 to 88518880 120 - TSS region transcription start site region 61983
Gm44430 6 88519013 to 88520007 994 + unclassified gene predicted gene, 44430
Kbtbd12 6 88547722 to 88627448 79726 - protein coding gene kelch repeat and BTB (POZ) domain containing 12
D6Mit261.1 6 88574968 to 88575090 122 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 261.1
D6Mit261 6 88575060 to 88575178 118 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 261
Stheal5 6 88575060 to 88575178 118 QTL soft tissue heal 5
Tssr57592 6 88575988 to 88575989 1 + TSS region transcription start site region 57592
Tssr1929 6 88578311 to 88578312 1 + TSS region transcription start site region 1929
Tssr61984 6 88601303 to 88601308 5 - TSS region transcription start site region 61984
Cpgi17703 6 88627224 to 88627878 654 CpG island CpG island 17703
Tssr61985 6 88627422 to 88627454 32 - TSS region transcription start site region 61985
Tssr57593 6 88636035 to 88636039 4 + TSS region transcription start site region 57593
Gm26588 6 88716422 to 88725860 9438 - antisense lncRNA gene predicted gene, 26588
Cpgi17704 6 88723907 to 88725282 1375 CpG island CpG island 17704
Mgll 6 88724412 to 88828360 103948 + protein coding gene monoglyceride lipase
Tssr57594 6 88724427 to 88724430 3 + TSS region transcription start site region 57594
Tssr57595 6 88724450 to 88724461 11 + TSS region transcription start site region 57595
Tssr57596 6 88724462 to 88724478 16 + TSS region transcription start site region 57596
Tssr57597 6 88724489 to 88724502 13 + TSS region transcription start site region 57597
Tssr57598 6 88724667 to 88724751 84 + TSS region transcription start site region 57598
Tssr57599 6 88724876 to 88724924 48 + TSS region transcription start site region 57599
Tssr61986 6 88726779 to 88726801 22 - TSS region transcription start site region 61986
Tssr57600 6 88733550 to 88733580 30 + TSS region transcription start site region 57600
Tssr57601 6 88733582 to 88733586 4 + TSS region transcription start site region 57601
Tssr57602 6 88733595 to 88733612 17 + TSS region transcription start site region 57602
Gm44005 6 88738192 to 88741364 3172 + unclassified gene predicted gene, 44005
Gm38859 6 88738613 to 88744194 5581 - lncRNA gene predicted gene, 38859
D6Mit190 6 88741422 to 88741570 148 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 190
Gm43999 6 88742727 to 88745615 2888 + unclassified gene predicted gene, 43999