MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 6:88050935-88161456

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm38855	6	88048137 to 88053844	5707	-	lncRNA gene	predicted gene, 38855
Tssr1927	6	88060866 to 88060873	7	+	TSS region	transcription start site region 1927
Tssr57564	6	88060879 to 88060889	10	+	TSS region	transcription start site region 57564
Tssr57565	6	88060923 to 88060930	7	+	TSS region	transcription start site region 57565
Cpgi17688	6	88074917 to 88075454	537		CpG island	CpG island 17688
Tssr1928	6	88075031 to 88075043	12	-	TSS region	transcription start site region 1928
Tssr57566	6	88075365 to 88075397	32	+	TSS region	transcription start site region 57566
Cpgi17689	6	88084361 to 88085172	811		CpG island	CpG island 17689
Rpn1	6	88084482 to 88105304	20822	+	protein coding gene	ribophorin I
Tssr57567	6	88084501 to 88084527	26	+	TSS region	transcription start site region 57567
Tssr57568	6	88090128 to 88090154	26	+	TSS region	transcription start site region 57568
Tssr57569	6	88093921 to 88093946	25	+	TSS region	transcription start site region 57569
Tssr57570	6	88095649 to 88095663	14	+	TSS region	transcription start site region 57570
Mir6376	6	88104128 to 88104258	130	-	miRNA gene	microRNA 6376
Cpgi17690	6	88105935 to 88106456	521		CpG island	CpG island 17690
D6Mit40	6	88122406 to 88122657	251		DNA segment	DNA segment, Chr 6, Massachusetts Institute of Technology 40
Gm38856	6	88151561 to 88154996	3435	+	lncRNA gene	predicted gene, 38856
Tssr57571	6	88152375 to 88152390	15	+	TSS region	transcription start site region 57571
Tssr61972	6	88161044 to 88161053	9	-	TSS region	transcription start site region 61972