Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:88000935-88211456

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54 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rab7 6 87999106 to 88045270 46164 - protein coding gene RAB7, member RAS oncogene family
Gm34872 6 88005199 to 88010650 5451 + lncRNA gene predicted gene, 34872
Tssr61966 6 88012209 to 88012217 8 - TSS region transcription start site region 61966
Tssr61967 6 88019971 to 88019972 1 - TSS region transcription start site region 61967
Tssr61968 6 88020855 to 88020871 16 - TSS region transcription start site region 61968
D6Ertd318e 6 88029845 to 88030079 234 DNA segment DNA segment, Chr 6, ERATO Doi 318, expressed
Gm44187 6 88040539 to 88042467 1928 - unclassified gene predicted gene, 44187
Tssr61969 6 88044295 to 88044331 36 - TSS region transcription start site region 61969
Cpgi17687 6 88044429 to 88045539 1110 CpG island CpG island 17687
Tssr61970 6 88045161 to 88045175 14 - TSS region transcription start site region 61970
Tssr61971 6 88045190 to 88045268 78 - TSS region transcription start site region 61971
Tssr57562 6 88045385 to 88045392 7 + TSS region transcription start site region 57562
Tssr57563 6 88048072 to 88048088 16 + TSS region transcription start site region 57563
Gm38855 6 88048137 to 88053844 5707 - lncRNA gene predicted gene, 38855
Tssr1927 6 88060866 to 88060873 7 + TSS region transcription start site region 1927
Tssr57564 6 88060879 to 88060889 10 + TSS region transcription start site region 57564
Tssr57565 6 88060923 to 88060930 7 + TSS region transcription start site region 57565
Cpgi17688 6 88074917 to 88075454 537 CpG island CpG island 17688
Tssr1928 6 88075031 to 88075043 12 - TSS region transcription start site region 1928
Tssr57566 6 88075365 to 88075397 32 + TSS region transcription start site region 57566
Cpgi17689 6 88084361 to 88085172 811 CpG island CpG island 17689
Rpn1 6 88084482 to 88105304 20822 + protein coding gene ribophorin I
Tssr57567 6 88084501 to 88084527 26 + TSS region transcription start site region 57567
Tssr57568 6 88090128 to 88090154 26 + TSS region transcription start site region 57568
Tssr57569 6 88093921 to 88093946 25 + TSS region transcription start site region 57569
Tssr57570 6 88095649 to 88095663 14 + TSS region transcription start site region 57570
Mir6376 6 88104128 to 88104258 130 - miRNA gene microRNA 6376
Cpgi17690 6 88105935 to 88106456 521 CpG island CpG island 17690
D6Mit40 6 88122406 to 88122657 251 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 40
Gm38856 6 88151561 to 88154996 3435 + lncRNA gene predicted gene, 38856
Tssr57571 6 88152375 to 88152390 15 + TSS region transcription start site region 57571
Tssr61972 6 88161044 to 88161053 9 - TSS region transcription start site region 61972
Tssr61973 6 88166161 to 88166172 11 - TSS region transcription start site region 61973
Gm38708 6 88188397 to 88190681 2284 - lincRNA gene predicted gene, 38708
Cpgi17691 6 88189316 to 88190823 1507 CpG island CpG island 17691
Tssr57572 6 88189900 to 88189907 7 + TSS region transcription start site region 57572
Cpgi17692 6 88193423 to 88194920 1497 CpG island CpG island 17692
Tssr57573 6 88193576 to 88193596 20 + TSS region transcription start site region 57573
Tssr57574 6 88193717 to 88193723 6 + TSS region transcription start site region 57574
Gata2 6 88193891 to 88207032 13141 + protein coding gene GATA binding protein 2
Cpgi17693 6 88196335 to 88197617 1282 CpG island CpG island 17693
Cpgi17694 6 88197950 to 88199936 1986 CpG island CpG island 17694
Tssr57575 6 88198330 to 88198334 4 + TSS region transcription start site region 57575
Tssr57576 6 88198656 to 88198675 19 + TSS region transcription start site region 57576
Tssr57577 6 88199645 to 88199682 37 + TSS region transcription start site region 57577
Tssr57578 6 88199692 to 88199699 7 + TSS region transcription start site region 57578
Tssr57579 6 88199721 to 88199733 12 + TSS region transcription start site region 57579
Tssr57580 6 88200135 to 88200149 14 + TSS region transcription start site region 57580
Cpgi17695 6 88200194 to 88200507 313 CpG island CpG island 17695
Tssr57581 6 88200287 to 88200297 10 + TSS region transcription start site region 57581
Tssr57582 6 88200579 to 88200593 14 + TSS region transcription start site region 57582
Tssr57583 6 88204440 to 88204449 9 + TSS region transcription start site region 57583
Cpgi17696 6 88204454 to 88204874 420 CpG island CpG island 17696
Tssr57584 6 88205857 to 88205880 23 + TSS region transcription start site region 57584