Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:87838666-87989890

Filter by:
39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Isy1 6 87818447 to 87838759 20312 - protein coding gene ISY1 splicing factor homolog
Cpgi17682 6 87838396 to 87839178 782 CpG island CpG island 17682
Tssr61943 6 87838671 to 87838792 121 - TSS region transcription start site region 61943
Tssr57554 6 87839091 to 87839101 10 + TSS region transcription start site region 57554
Cnbp 6 87842615 to 87851106 8491 - protein coding gene cellular nucleic acid binding protein
Tssr61944 6 87843461 to 87843539 78 - TSS region transcription start site region 61944
Tssr61945 6 87843626 to 87843692 66 - TSS region transcription start site region 61945
Tssr57555 6 87843742 to 87843780 38 + TSS region transcription start site region 57555
Tssr61946 6 87843795 to 87843855 60 - TSS region transcription start site region 61946
Tssr61947 6 87844017 to 87844088 71 - TSS region transcription start site region 61947
Tssr61948 6 87845309 to 87845329 20 - TSS region transcription start site region 61948
Tssr61949 6 87845694 to 87845707 13 - TSS region transcription start site region 61949
Cpgi17683 6 87850264 to 87851576 1312 CpG island CpG island 17683
Tssr61950 6 87850972 to 87850983 11 - TSS region transcription start site region 61950
Tssr61951 6 87851011 to 87851054 43 - TSS region transcription start site region 61951
Tssr61952 6 87851074 to 87851085 11 - TSS region transcription start site region 61952
Tssr57556 6 87851171 to 87851243 72 + TSS region transcription start site region 57556
Gm44064 6 87851209 to 87852295 1086 + unclassified gene predicted gene, 44064
Tssr61953 6 87851529 to 87851565 36 - TSS region transcription start site region 61953
Cpgi17684 6 87887700 to 87888239 539 CpG island CpG island 17684
Copg1 6 87887819 to 87913595 25776 + protein coding gene coatomer protein complex, subunit gamma 1
Tssr57557 6 87887888 to 87888016 128 + TSS region transcription start site region 57557
Gm26636 6 87908843 to 87914459 5616 - antisense lncRNA gene predicted gene, 26636
Cpgi17685 6 87913666 to 87914890 1224 CpG island CpG island 17685
Hmces 6 87913935 to 87936629 22694 + protein coding gene 5-hydroxymethylcytosine (hmC) binding, ES cell specific
Tssr57558 6 87913936 to 87913976 40 + TSS region transcription start site region 57558
Tssr57559 6 87913986 to 87913999 13 + TSS region transcription start site region 57559
Gm19038 6 87928874 to 87930285 1411 - pseudogene predicted gene, 19038
Rps19-ps9 6 87948464 to 87948877 413 - pseudogene ribosomal protein S19, pseudogene 9
Tssr61954 6 87965526 to 87965530 4 - TSS region transcription start site region 61954
Cpgi17686 6 87980290 to 87982314 2024 CpG island CpG island 17686
H1fx 6 87980421 to 87981482 1061 - protein coding gene H1 histone family, member X
Tssr61955 6 87980965 to 87980980 15 - TSS region transcription start site region 61955
Tssr61956 6 87981611 to 87981622 11 - TSS region transcription start site region 61956
Gm47286 6 87981614 to 87981741 127 - miRNA gene predicted gene, 47286
Tssr61957 6 87981629 to 87981645 16 - TSS region transcription start site region 61957
Gm5577 6 87981683 to 87984180 2497 + antisense lncRNA gene predicted gene 5577
Tssr57560 6 87981704 to 87981717 13 + TSS region transcription start site region 57560
Gm44168 6 87986191 to 87989729 3538 + unclassified gene predicted gene, 44168