Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:87338994-87524512

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51 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cia6 6 4464884 to 87426034 82961150 QTL collagen induced arthritis QTL 6
Pgia19 6 45314059 to 87426034 42111975 QTL proteoglycan induced arthritis 19
Gkn1 6 87345653 to 87350915 5262 - protein coding gene gastrokine 1
Tssr1923 6 87346196 to 87346203 7 - TSS region transcription start site region 1923
Tssr61884 6 87346348 to 87346367 19 - TSS region transcription start site region 61884
Tssr57535 6 87347066 to 87347071 5 + TSS region transcription start site region 57535
Tssr61885 6 87349043 to 87349073 30 - TSS region transcription start site region 61885
Tssr61886 6 87350904 to 87350921 17 - TSS region transcription start site region 61886
Tssr57536 6 87373357 to 87373370 13 + TSS region transcription start site region 57536
Gkn2 6 87373365 to 87379494 6129 + protein coding gene gastrokine 2
Tssr57537 6 87375750 to 87375768 18 + TSS region transcription start site region 57537
Tssr57538 6 87375788 to 87375796 8 + TSS region transcription start site region 57538
Tssr57539 6 87375808 to 87375822 14 + TSS region transcription start site region 57539
Tssr57540 6 87378127 to 87378141 14 + TSS region transcription start site region 57540
Tssr61887 6 87378237 to 87378275 38 - TSS region transcription start site region 61887
Tssr57541 6 87379285 to 87379292 7 + TSS region transcription start site region 57541
Tssr1924 6 87379350 to 87379356 6 + TSS region transcription start site region 1924
Tssr57542 6 87379363 to 87379374 11 + TSS region transcription start site region 57542
Tssr61888 6 87379464 to 87379499 35 - TSS region transcription start site region 61888
Gkn3 6 87383319 to 87388935 5616 - protein coding gene gastrokine 3
Tssr61889 6 87388846 to 87388862 16 - TSS region transcription start site region 61889
Tssr61890 6 87388878 to 87388892 14 - TSS region transcription start site region 61890
Skl3 6 87425898 to 87426034 136 QTL skeletal size (tail length) 3
Egrm2 6 87425898 to 87426034 136 QTL early growth rate, maternal effect 2
D6Mit9 6 87425898 to 87426034 136 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 9
Bits2 6 87425898 to 87426034 136 QTL bitterness sensitivity 2
Tssr57543 6 87428986 to 87429000 14 + TSS region transcription start site region 57543
Bmp10 6 87428994 to 87434512 5518 + protein coding gene bone morphogenetic protein 10
Tssr57544 6 87429076 to 87429087 11 + TSS region transcription start site region 57544
Tssr61891 6 87458097 to 87458123 26 - TSS region transcription start site region 61891
Tssr61892 6 87458246 to 87458259 13 - TSS region transcription start site region 61892
Arhgap25 6 87458545 to 87533259 74714 - protein coding gene Rho GTPase activating protein 25
Tssr61893 6 87459215 to 87459229 14 - TSS region transcription start site region 61893
Tssr61894 6 87459269 to 87459293 24 - TSS region transcription start site region 61894
Tssr61895 6 87459331 to 87459340 9 - TSS region transcription start site region 61895
Tssr61896 6 87459475 to 87459515 40 - TSS region transcription start site region 61896
Tssr61897 6 87467951 to 87467977 26 - TSS region transcription start site region 61897
Tssr61898 6 87483381 to 87483392 11 - TSS region transcription start site region 61898
Tssr61899 6 87491152 to 87491164 12 - TSS region transcription start site region 61899
Tssr61900 6 87496235 to 87496268 33 - TSS region transcription start site region 61900
Tssr61901 6 87496279 to 87496332 53 - TSS region transcription start site region 61901
Tssr57545 6 87496413 to 87496439 26 + TSS region transcription start site region 57545
Tssr61902 6 87496694 to 87496713 19 - TSS region transcription start site region 61902
Tssr61903 6 87502766 to 87502777 11 - TSS region transcription start site region 61903
Tssr61904 6 87503734 to 87503761 27 - TSS region transcription start site region 61904
Tssr61905 6 87508073 to 87508097 24 - TSS region transcription start site region 61905
Tssr61906 6 87511057 to 87511081 24 - TSS region transcription start site region 61906
Tssr61907 6 87511138 to 87511151 13 - TSS region transcription start site region 61907
Tssr61908 6 87511182 to 87511194 12 - TSS region transcription start site region 61908
Tssr61909 6 87512283 to 87512303 20 - TSS region transcription start site region 61909
Tssr61910 6 87517386 to 87517393 7 - TSS region transcription start site region 61910