Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Cia6 | 6 | 82961150 | QTL | collagen induced arthritis QTL 6 | ||
Pgia19 | 6 | 42111975 | QTL | proteoglycan induced arthritis 19 | ||
Antxr1 | 6 | 201956 | - | protein coding gene | anthrax toxin receptor 1 | |
Gm44414 | 6 | 2108 | - | unclassified gene | predicted gene, 44414 | |
Cpgi17675 | 6 | 637 | CpG island | CpG island 17675 | ||
Tssr61877 | 6 | 9 | - | TSS region | transcription start site region 61877 | |
Tssr61878 | 6 | 15 | - | TSS region | transcription start site region 61878 | |
Tssr61879 | 6 | 26 | - | TSS region | transcription start site region 61879 | |
Tssr61880 | 6 | 7 | - | TSS region | transcription start site region 61880 | |
Tssr61881 | 6 | 17 | - | TSS region | transcription start site region 61881 | |
Tssr61882 | 6 | 29 | - | TSS region | transcription start site region 61882 | |
Tssr61883 | 6 | 11 | - | TSS region | transcription start site region 61883 | |
Gkn1 | 6 | 5262 | - | protein coding gene | gastrokine 1 | |
Tssr1923 | 6 | 7 | - | TSS region | transcription start site region 1923 | |
Tssr61884 | 6 | 19 | - | TSS region | transcription start site region 61884 | |
Tssr57535 | 6 | 5 | + | TSS region | transcription start site region 57535 | |
Tssr61885 | 6 | 30 | - | TSS region | transcription start site region 61885 | |
Tssr61886 | 6 | 17 | - | TSS region | transcription start site region 61886 | |
Tssr57536 | 6 | 13 | + | TSS region | transcription start site region 57536 | |
Gkn2 | 6 | 6129 | + | protein coding gene | gastrokine 2 | |
Tssr57537 | 6 | 18 | + | TSS region | transcription start site region 57537 | |
Tssr57538 | 6 | 8 | + | TSS region | transcription start site region 57538 | |
Tssr57539 | 6 | 14 | + | TSS region | transcription start site region 57539 | |
Tssr57540 | 6 | 14 | + | TSS region | transcription start site region 57540 | |
Tssr61887 | 6 | 38 | - | TSS region | transcription start site region 61887 | |
Tssr57541 | 6 | 7 | + | TSS region | transcription start site region 57541 | |
Tssr1924 | 6 | 6 | + | TSS region | transcription start site region 1924 | |
Tssr57542 | 6 | 11 | + | TSS region | transcription start site region 57542 | |
Tssr61888 | 6 | 35 | - | TSS region | transcription start site region 61888 | |
Gkn3 | 6 | 5616 | - | protein coding gene | gastrokine 3 | |
Tssr61889 | 6 | 16 | - | TSS region | transcription start site region 61889 | |
Tssr61890 | 6 | 14 | - | TSS region | transcription start site region 61890 | |
D6Mit9 | 6 | 136 | DNA segment | DNA segment, Chr 6, Massachusetts Institute of Technology 9 | ||
Egrm2 | 6 | 136 | QTL | early growth rate, maternal effect 2 | ||
Skl3 | 6 | 136 | QTL | skeletal size (tail length) 3 | ||
Bits2 | 6 | 136 | QTL | bitterness sensitivity 2 | ||
Tssr57543 | 6 | 14 | + | TSS region | transcription start site region 57543 | |
Bmp10 | 6 | 5518 | + | protein coding gene | bone morphogenetic protein 10 | |
Tssr57544 | 6 | 11 | + | TSS region | transcription start site region 57544 | |
Tssr61891 | 6 | 26 | - | TSS region | transcription start site region 61891 | |
Tssr61892 | 6 | 13 | - | TSS region | transcription start site region 61892 | |
Arhgap25 | 6 | 74714 | - | protein coding gene | Rho GTPase activating protein 25 | |
Tssr61893 | 6 | 14 | - | TSS region | transcription start site region 61893 | |
Tssr61894 | 6 | 24 | - | TSS region | transcription start site region 61894 | |
Tssr61895 | 6 | 9 | - | TSS region | transcription start site region 61895 | |
Tssr61896 | 6 | 40 | - | TSS region | transcription start site region 61896 | |
Tssr61897 | 6 | 26 | - | TSS region | transcription start site region 61897 | |
Tssr61898 | 6 | 11 | - | TSS region | transcription start site region 61898 | |
Tssr61899 | 6 | 12 | - | TSS region | transcription start site region 61899 | |
Tssr61900 | 6 | 33 | - | TSS region | transcription start site region 61900 | |
Tssr61901 | 6 | 53 | - | TSS region | transcription start site region 61901 | |
Tssr57545 | 6 | 26 | + | TSS region | transcription start site region 57545 | |
Tssr61902 | 6 | 19 | - | TSS region | transcription start site region 61902 | |
Tssr61903 | 6 | 11 | - | TSS region | transcription start site region 61903 | |
Tssr61904 | 6 | 27 | - | TSS region | transcription start site region 61904 | |
Tssr61905 | 6 | 24 | - | TSS region | transcription start site region 61905 | |
Tssr61906 | 6 | 24 | - | TSS region | transcription start site region 61906 | |
Tssr61907 | 6 | 13 | - | TSS region | transcription start site region 61907 | |
Tssr61908 | 6 | 12 | - | TSS region | transcription start site region 61908 | |
Tssr61909 | 6 | 20 | - | TSS region | transcription start site region 61909 | |
Tssr61910 | 6 | 7 | - | TSS region | transcription start site region 61910 | |
D6Mit213 | 6 | 143 | DNA segment | DNA segment, Chr 6, Massachusetts Institute of Technology 213 | ||
Tssr61911 | 6 | 22 | - | TSS region | transcription start site region 61911 | |
Tssr61912 | 6 | 15 | - | TSS region | transcription start site region 61912 | |
Tssr61913 | 6 | 49 | - | TSS region | transcription start site region 61913 | |
Tssr61914 | 6 | 30 | - | TSS region | transcription start site region 61914 | |
Tssr61915 | 6 | 20 | - | TSS region | transcription start site region 61915 | |
Tssr61916 | 6 | 7 | - | TSS region | transcription start site region 61916 | |
Tssr61917 | 6 | 9 | - | TSS region | transcription start site region 61917 | |
Tssr61918 | 6 | 22 | - | TSS region | transcription start site region 61918 | |
Tssr61919 | 6 | 37 | - | TSS region | transcription start site region 61919 | |
Tssr61920 | 6 | 45 | - | TSS region | transcription start site region 61920 | |
Tssr1925 | 6 | 31 | - | TSS region | transcription start site region 1925 | |
Gm44198 | 6 | 2635 | + | unclassified gene | predicted gene, 44198 | |
Tssr61921 | 6 | 15 | - | TSS region | transcription start site region 61921 | |
Prokr1 | 6 | 12152 | - | protein coding gene | prokineticin receptor 1 | |
Tssr61922 | 6 | 13 | - | TSS region | transcription start site region 61922 | |
Cpgi17676 | 6 | 649 | CpG island | CpG island 17676 | ||
Gm34222 | 6 | 5943 | + | lncRNA gene | predicted gene, 34222 | |
Cpgi17677 | 6 | 635 | CpG island | CpG island 17677 | ||
Tssr61923 | 6 | 40 | - | TSS region | transcription start site region 61923 | |
Gm34312 | 6 | 1354 | + | lincRNA gene | predicted gene, 34312 | |
Aplf | 6 | 43769 | - | protein coding gene | aprataxin and PNKP like factor | |
Gm46964 | 6 | 2850 | + | lncRNA gene | predicted gene, 46964 | |
Gm38852 | 6 | 2611 | - | lncRNA gene | predicted gene, 38852 | |
Tssr57546 | 6 | 11 | + | TSS region | transcription start site region 57546 | |
Gm44097 | 6 | 6069 | + | antisense lncRNA gene | predicted gene, 44097 | |
Tssr57547 | 6 | 7 | + | TSS region | transcription start site region 57547 | |
Cpgi17678 | 6 | 353 | CpG island | CpG island 17678 | ||
Tssr61924 | 6 | 17 | - | TSS region | transcription start site region 61924 | |
Tssr61925 | 6 | 37 | - | TSS region | transcription start site region 61925 | |
Tssr61926 | 6 | 12 | - | TSS region | transcription start site region 61926 | |
1810020O05Rik | 6 | 15254 | - | lincRNA gene | Riken cDNA 1810020O05 gene | |
E230015B07Rik | 6 | 5262 | + | bidirectional promoter lncRNA gene | RIKEN cDNA E230015B07 gene | |
Tssr61927 | 6 | 33 | - | TSS region | transcription start site region 61927 | |
D6Mit228 | 6 | 105 | DNA segment | DNA segment, Chr 6, Massachusetts Institute of Technology 228 | ||
Tssr61928 | 6 | 14 | - | TSS region | transcription start site region 61928 | |
Tssr61929 | 6 | 19 | - | TSS region | transcription start site region 61929 | |
Tssr61930 | 6 | 15 | - | TSS region | transcription start site region 61930 | |
Gm44210 | 6 | 1184 | - | antisense lncRNA gene | predicted gene, 44210 | |
Cpgi17679 | 6 | 1667 | CpG island | CpG island 17679 | ||
Efcc1 | 6 | 25039 | + | protein coding gene | EF hand and coiled-coil domain containing 1 | |
Tssr61931 | 6 | 34 | - | TSS region | transcription start site region 61931 | |
Tssr61932 | 6 | 35 | - | TSS region | transcription start site region 61932 | |
Cpgi17680 | 6 | 806 | CpG island | CpG island 17680 | ||
Tssr57548 | 6 | 37 | + | TSS region | transcription start site region 57548 | |
Gm34414 | 6 | 8151 | - | lncRNA gene | predicted gene, 34414 | |
Tssr57549 | 6 | 13 | + | TSS region | transcription start site region 57549 | |
Tssr61933 | 6 | 11 | - | TSS region | transcription start site region 61933 | |
Tssr61934 | 6 | 27 | - | TSS region | transcription start site region 61934 | |
Gm5879 | 6 | 1208 | - | pseudogene | predicted gene 5879 | |
Tssr57550 | 6 | 20 | + | TSS region | transcription start site region 57550 | |
Gm43904 | 6 | 1337 | + | lincRNA gene | predicted gene, 43904 | |
Tssr57551 | 6 | 18 | + | TSS region | transcription start site region 57551 | |
Gp9 | 6 | 1696 | + | protein coding gene | glycoprotein 9 (platelet) | |
Tssr57552 | 6 | 28 | + | TSS region | transcription start site region 57552 | |
Rab43 | 6 | 23311 | - | protein coding gene | RAB43, member RAS oncogene family | |
Gm45140 | 6 | 46934 | - | protein coding gene | predicted gene 45140 | |
Tssr61935 | 6 | 10 | - | TSS region | transcription start site region 61935 | |
Tssr1926 | 6 | 15 | - | TSS region | transcription start site region 1926 | |
Gm44423 | 6 | 3157 | - | unclassified gene | predicted gene, 44423 | |
9930120I10Rik | 6 | 864 | - | unclassified gene | RIKEN cDNA 9930120I10 gene | |
Tssr61936 | 6 | 37 | - | TSS region | transcription start site region 61936 | |
Tssr61937 | 6 | 18 | - | TSS region | transcription start site region 61937 | |
Tssr61938 | 6 | 22 | - | TSS region | transcription start site region 61938 | |
Cpgi17681 | 6 | 1701 | CpG island | CpG island 17681 | ||
Tssr57553 | 6 | 15 | + | TSS region | transcription start site region 57553 | |
Tssr61939 | 6 | 15 | - | TSS region | transcription start site region 61939 | |
Tssr61940 | 6 | 31 | - | TSS region | transcription start site region 61940 | |
Tssr61941 | 6 | 32 | - | TSS region | transcription start site region 61941 | |
Isy1 | 6 | 20312 | - | protein coding gene | ISY1 splicing factor homolog | |
Tssr61942 | 6 | 3 | - | TSS region | transcription start site region 61942 | |
B130021K23Rik | 6 | 2592 | - | unclassified gene | RIKEN cDNA B130021K23 gene | |
Cpgi17682 | 6 | 782 | CpG island | CpG island 17682 | ||
Tssr61943 | 6 | 121 | - | TSS region | transcription start site region 61943 | |
Tssr57554 | 6 | 10 | + | TSS region | transcription start site region 57554 | |
Cnbp | 6 | 8491 | - | protein coding gene | cellular nucleic acid binding protein | |
Tssr61944 | 6 | 78 | - | TSS region | transcription start site region 61944 | |
Tssr61945 | 6 | 66 | - | TSS region | transcription start site region 61945 | |
Tssr57555 | 6 | 38 | + | TSS region | transcription start site region 57555 | |
Tssr61946 | 6 | 60 | - | TSS region | transcription start site region 61946 | |
Tssr61947 | 6 | 71 | - | TSS region | transcription start site region 61947 | |
Tssr61948 | 6 | 20 | - | TSS region | transcription start site region 61948 | |
Tssr61949 | 6 | 13 | - | TSS region | transcription start site region 61949 | |
Cpgi17683 | 6 | 1312 | CpG island | CpG island 17683 | ||
Tssr61950 | 6 | 11 | - | TSS region | transcription start site region 61950 | |
Tssr61951 | 6 | 43 | - | TSS region | transcription start site region 61951 | |
Tssr61952 | 6 | 11 | - | TSS region | transcription start site region 61952 | |
Tssr57556 | 6 | 72 | + | TSS region | transcription start site region 57556 | |
Gm44064 | 6 | 1086 | + | unclassified gene | predicted gene, 44064 | |
Tssr61953 | 6 | 36 | - | TSS region | transcription start site region 61953 | |
Cpgi17684 | 6 | 539 | CpG island | CpG island 17684 | ||
Copg1 | 6 | 25776 | + | protein coding gene | coatomer protein complex, subunit gamma 1 | |
Tssr57557 | 6 | 128 | + | TSS region | transcription start site region 57557 | |
Gm26636 | 6 | 5616 | - | antisense lncRNA gene | predicted gene, 26636 | |
Cpgi17685 | 6 | 1224 | CpG island | CpG island 17685 | ||
Hmces | 6 | 22694 | + | protein coding gene | 5-hydroxymethylcytosine (hmC) binding, ES cell specific | |
Tssr57558 | 6 | 40 | + | TSS region | transcription start site region 57558 | |
Tssr57559 | 6 | 13 | + | TSS region | transcription start site region 57559 | |
Gm19038 | 6 | 1411 | - | pseudogene | predicted gene, 19038 | |
Rps19-ps9 | 6 | 413 | - | pseudogene | ribosomal protein S19, pseudogene 9 | |
Tssr61954 | 6 | 4 | - | TSS region | transcription start site region 61954 | |
Cpgi17686 | 6 | 2024 | CpG island | CpG island 17686 | ||
H1fx | 6 | 1061 | - | protein coding gene | H1 histone family, member X | |
Tssr61955 | 6 | 15 | - | TSS region | transcription start site region 61955 | |
Tssr61956 | 6 | 11 | - | TSS region | transcription start site region 61956 | |
Gm47286 | 6 | 127 | - | miRNA gene | predicted gene, 47286 | |
Tssr61957 | 6 | 16 | - | TSS region | transcription start site region 61957 | |
Gm5577 | 6 | 2497 | + | antisense lncRNA gene | predicted gene 5577 | |
Tssr57560 | 6 | 13 | + | TSS region | transcription start site region 57560 | |
Gm44168 | 6 | 3538 | + | unclassified gene | predicted gene, 44168 | |
Tssr61958 | 6 | 6 | - | TSS region | transcription start site region 61958 | |
4933412L11Rik | 6 | 1043 | - | unclassified gene | RIKEN cDNA 4933412L11 gene | |
Tssr61959 | 6 | 3 | - | TSS region | transcription start site region 61959 | |
Tssr61960 | 6 | 23 | - | TSS region | transcription start site region 61960 | |
Tssr61961 | 6 | 44 | - | TSS region | transcription start site region 61961 | |
Tssr61962 | 6 | 7 | - | TSS region | transcription start site region 61962 | |
Rab7 | 6 | 46164 | - | protein coding gene | RAB7, member RAS oncogene family | |
Tssr57561 | 6 | 35 | + | TSS region | transcription start site region 57561 | |
Tssr61963 | 6 | 39 | - | TSS region | transcription start site region 61963 | |
Tssr61964 | 6 | 13 | - | TSS region | transcription start site region 61964 | |
Tssr61965 | 6 | 23 | - | TSS region | transcription start site region 61965 | |
Gm34872 | 6 | 5451 | + | lncRNA gene | predicted gene, 34872 | |
Tssr61966 | 6 | 8 | - | TSS region | transcription start site region 61966 | |
Tssr61967 | 6 | 1 | - | TSS region | transcription start site region 61967 | |
Tssr61968 | 6 | 16 | - | TSS region | transcription start site region 61968 | |
D6Ertd318e | 6 | 234 | DNA segment | DNA segment, Chr 6, ERATO Doi 318, expressed | ||
Gm44187 | 6 | 1928 | - | unclassified gene | predicted gene, 44187 | |
Tssr61969 | 6 | 36 | - | TSS region | transcription start site region 61969 | |
Cpgi17687 | 6 | 1110 | CpG island | CpG island 17687 | ||
Tssr61970 | 6 | 14 | - | TSS region | transcription start site region 61970 | |
Tssr61971 | 6 | 78 | - | TSS region | transcription start site region 61971 | |
Tssr57562 | 6 | 7 | + | TSS region | transcription start site region 57562 | |
Tssr57563 | 6 | 16 | + | TSS region | transcription start site region 57563 | |
Gm38855 | 6 | 5707 | - | lncRNA gene | predicted gene, 38855 | |
Tssr1927 | 6 | 7 | + | TSS region | transcription start site region 1927 | |
Tssr57564 | 6 | 10 | + | TSS region | transcription start site region 57564 | |
Tssr57565 | 6 | 7 | + | TSS region | transcription start site region 57565 | |
Cpgi17688 | 6 | 537 | CpG island | CpG island 17688 | ||
Tssr1928 | 6 | 12 | - | TSS region | transcription start site region 1928 |