Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Cia6 | 6 | 82961150 | QTL | collagen induced arthritis QTL 6 | ||
Pgia19 | 6 | 42111975 | QTL | proteoglycan induced arthritis 19 | ||
Aak1 | 6 | 153706 | + | protein coding gene | AP2 associated kinase 1 | |
Tssr57512 | 6 | 18 | + | TSS region | transcription start site region 57512 | |
Tssr57513 | 6 | 11 | + | TSS region | transcription start site region 57513 | |
Gm44153 | 6 | 1579 | + | unclassified gene | predicted gene, 44153 | |
Tssr57514 | 6 | 4 | + | TSS region | transcription start site region 57514 | |
Tssr57515 | 6 | 3 | + | TSS region | transcription start site region 57515 | |
Gm44152 | 6 | 1690 | + | unclassified gene | predicted gene, 44152 | |
D6Mit323 | 6 | 123 | DNA segment | DNA Segment, Chr 6, Massachusetts Institute of Technology 323 | ||
Tssr57516 | 6 | 8 | + | TSS region | transcription start site region 57516 | |
Tssr57517 | 6 | 23 | + | TSS region | transcription start site region 57517 | |
Tssr57518 | 6 | 23 | + | TSS region | transcription start site region 57518 | |
Tssr57519 | 6 | 25 | + | TSS region | transcription start site region 57519 | |
Tssr57520 | 6 | 37 | + | TSS region | transcription start site region 57520 | |
Tssr57521 | 6 | 7 | + | TSS region | transcription start site region 57521 | |
Gm44093 | 6 | 1801 | + | unclassified gene | predicted gene, 44093 | |
Gm44091 | 6 | 648 | + | sense intronic lncRNA gene | predicted gene, 44091 | |
Gm38495 | 6 | 8250 | + | protein coding gene | predicted gene, 38495 | |
Tssr57522 | 6 | 23 | + | TSS region | transcription start site region 57522 | |
Nfu1 | 6 | 19170 | + | protein coding gene | NFU1 iron-sulfur cluster scaffold | |
Cpgi17672 | 6 | 628 | CpG island | CpG island 17672 | ||
Tssr57523 | 6 | 21 | + | TSS region | transcription start site region 57523 | |
Tssr57524 | 6 | 13 | + | TSS region | transcription start site region 57524 | |
Tssr57525 | 6 | 20 | + | TSS region | transcription start site region 57525 | |
Cpgi17673 | 6 | 1176 | CpG island | CpG island 17673 | ||
Tssr57526 | 6 | 80 | + | TSS region | transcription start site region 57526 | |
Gfpt1 | 6 | 49351 | + | protein coding gene | glutamine fructose-6-phosphate transaminase 1 | |
Tssr57527 | 6 | 11 | + | TSS region | transcription start site region 57527 | |
Tssr57528 | 6 | 11 | + | TSS region | transcription start site region 57528 | |
Tssr57529 | 6 | 11 | + | TSS region | transcription start site region 57529 | |
Tssr57530 | 6 | 32 | + | TSS region | transcription start site region 57530 | |
Tssr57531 | 6 | 8 | + | TSS region | transcription start site region 57531 | |
D6Ertd527e | 6 | 8251 | + | protein coding gene | DNA segment, Chr 6, ERATO Doi 527, expressed | |
Gm40382 | 6 | 5694 | - | lncRNA gene | predicted gene, 40382 | |
Antxr1 | 6 | 201956 | - | protein coding gene | anthrax toxin receptor 1 | |
Tssr61868 | 6 | 12 | - | TSS region | transcription start site region 61868 | |
Gm44415 | 6 | 2111 | - | unclassified gene | predicted gene, 44415 | |
Gm44416 | 6 | 2065 | - | unclassified gene | predicted gene, 44416 | |
Tssr61869 | 6 | 2 | - | TSS region | transcription start site region 61869 | |
Tssr61870 | 6 | 12 | - | TSS region | transcription start site region 61870 | |
Tssr57532 | 6 | 6 | + | TSS region | transcription start site region 57532 | |
Tssr61871 | 6 | 12 | - | TSS region | transcription start site region 61871 | |
Gm38851 | 6 | 46197 | + | lncRNA gene | predicted gene, 38851 | |
Tssr61872 | 6 | 16 | - | TSS region | transcription start site region 61872 | |
Tssr61873 | 6 | 15 | - | TSS region | transcription start site region 61873 | |
Gm44417 | 6 | 3358 | - | unclassified gene | predicted gene, 44417 | |
Tssr61874 | 6 | 38 | - | TSS region | transcription start site region 61874 | |
Tssr57533 | 6 | 29 | + | TSS region | transcription start site region 57533 | |
Tssr57534 | 6 | 12 | + | TSS region | transcription start site region 57534 | |
Gm44418 | 6 | 2005 | + | antisense lncRNA gene | predicted gene, 44418 | |
n-R5s164 | 6 | 111 | + | rRNA gene | nuclear encoded rRNA 5S 164 | |
Gm34170 | 6 | 2679 | + | lncRNA gene | predicted gene, 34170 | |
Tssr61875 | 6 | 51 | - | TSS region | transcription start site region 61875 | |
Tssr61876 | 6 | 14 | - | TSS region | transcription start site region 61876 | |
Cpgi17674 | 6 | 276 | CpG island | CpG island 17674 | ||
9530013L04Rik | 6 | 781 | - | unclassified gene | RIKEN cDNA 9530013L04 gene | |
Gm34090 | 6 | 8969 | - | lncRNA gene | predicted gene, 34090 | |
Gm44414 | 6 | 2108 | - | unclassified gene | predicted gene, 44414 | |
Cpgi17675 | 6 | 637 | CpG island | CpG island 17675 | ||
Tssr61877 | 6 | 9 | - | TSS region | transcription start site region 61877 | |
Tssr61878 | 6 | 15 | - | TSS region | transcription start site region 61878 | |
Tssr61879 | 6 | 26 | - | TSS region | transcription start site region 61879 | |
Tssr61880 | 6 | 7 | - | TSS region | transcription start site region 61880 | |
Tssr61881 | 6 | 17 | - | TSS region | transcription start site region 61881 | |
Tssr61882 | 6 | 29 | - | TSS region | transcription start site region 61882 | |
Tssr61883 | 6 | 11 | - | TSS region | transcription start site region 61883 | |
Gkn1 | 6 | 5262 | - | protein coding gene | gastrokine 1 | |
Tssr1923 | 6 | 7 | - | TSS region | transcription start site region 1923 | |
Tssr61884 | 6 | 19 | - | TSS region | transcription start site region 61884 | |
Tssr57535 | 6 | 5 | + | TSS region | transcription start site region 57535 | |
Tssr61885 | 6 | 30 | - | TSS region | transcription start site region 61885 | |
Tssr61886 | 6 | 17 | - | TSS region | transcription start site region 61886 | |
Tssr57536 | 6 | 13 | + | TSS region | transcription start site region 57536 | |
Gkn2 | 6 | 6129 | + | protein coding gene | gastrokine 2 | |
Tssr57537 | 6 | 18 | + | TSS region | transcription start site region 57537 | |
Tssr57538 | 6 | 8 | + | TSS region | transcription start site region 57538 | |
Tssr57539 | 6 | 14 | + | TSS region | transcription start site region 57539 | |
Tssr57540 | 6 | 14 | + | TSS region | transcription start site region 57540 | |
Tssr61887 | 6 | 38 | - | TSS region | transcription start site region 61887 | |
Tssr57541 | 6 | 7 | + | TSS region | transcription start site region 57541 | |
Tssr1924 | 6 | 6 | + | TSS region | transcription start site region 1924 | |
Tssr57542 | 6 | 11 | + | TSS region | transcription start site region 57542 | |
Tssr61888 | 6 | 35 | - | TSS region | transcription start site region 61888 | |
Gkn3 | 6 | 5616 | - | protein coding gene | gastrokine 3 | |
Tssr61889 | 6 | 16 | - | TSS region | transcription start site region 61889 | |
Tssr61890 | 6 | 14 | - | TSS region | transcription start site region 61890 | |
D6Mit9 | 6 | 136 | DNA segment | DNA segment, Chr 6, Massachusetts Institute of Technology 9 | ||
Egrm2 | 6 | 136 | QTL | early growth rate, maternal effect 2 | ||
Skl3 | 6 | 136 | QTL | skeletal size (tail length) 3 | ||
Bits2 | 6 | 136 | QTL | bitterness sensitivity 2 | ||
Tssr57543 | 6 | 14 | + | TSS region | transcription start site region 57543 | |
Bmp10 | 6 | 5518 | + | protein coding gene | bone morphogenetic protein 10 | |
Tssr57544 | 6 | 11 | + | TSS region | transcription start site region 57544 | |
Tssr61891 | 6 | 26 | - | TSS region | transcription start site region 61891 | |
Tssr61892 | 6 | 13 | - | TSS region | transcription start site region 61892 | |
Arhgap25 | 6 | 74714 | - | protein coding gene | Rho GTPase activating protein 25 | |
Tssr61893 | 6 | 14 | - | TSS region | transcription start site region 61893 | |
Tssr61894 | 6 | 24 | - | TSS region | transcription start site region 61894 | |
Tssr61895 | 6 | 9 | - | TSS region | transcription start site region 61895 | |
Tssr61896 | 6 | 40 | - | TSS region | transcription start site region 61896 | |
Tssr61897 | 6 | 26 | - | TSS region | transcription start site region 61897 | |
Tssr61898 | 6 | 11 | - | TSS region | transcription start site region 61898 | |
Tssr61899 | 6 | 12 | - | TSS region | transcription start site region 61899 | |
Tssr61900 | 6 | 33 | - | TSS region | transcription start site region 61900 | |
Tssr61901 | 6 | 53 | - | TSS region | transcription start site region 61901 | |
Tssr57545 | 6 | 26 | + | TSS region | transcription start site region 57545 | |
Tssr61902 | 6 | 19 | - | TSS region | transcription start site region 61902 | |
Tssr61903 | 6 | 11 | - | TSS region | transcription start site region 61903 | |
Tssr61904 | 6 | 27 | - | TSS region | transcription start site region 61904 | |
Tssr61905 | 6 | 24 | - | TSS region | transcription start site region 61905 | |
Tssr61906 | 6 | 24 | - | TSS region | transcription start site region 61906 | |
Tssr61907 | 6 | 13 | - | TSS region | transcription start site region 61907 | |
Tssr61908 | 6 | 12 | - | TSS region | transcription start site region 61908 | |
Tssr61909 | 6 | 20 | - | TSS region | transcription start site region 61909 | |
Tssr61910 | 6 | 7 | - | TSS region | transcription start site region 61910 | |
D6Mit213 | 6 | 143 | DNA segment | DNA segment, Chr 6, Massachusetts Institute of Technology 213 | ||
Tssr61911 | 6 | 22 | - | TSS region | transcription start site region 61911 | |
Tssr61912 | 6 | 15 | - | TSS region | transcription start site region 61912 | |
Tssr61913 | 6 | 49 | - | TSS region | transcription start site region 61913 | |
Tssr61914 | 6 | 30 | - | TSS region | transcription start site region 61914 | |
Tssr61915 | 6 | 20 | - | TSS region | transcription start site region 61915 | |
Tssr61916 | 6 | 7 | - | TSS region | transcription start site region 61916 | |
Tssr61917 | 6 | 9 | - | TSS region | transcription start site region 61917 | |
Tssr61918 | 6 | 22 | - | TSS region | transcription start site region 61918 | |
Tssr61919 | 6 | 37 | - | TSS region | transcription start site region 61919 | |
Tssr61920 | 6 | 45 | - | TSS region | transcription start site region 61920 | |
Tssr1925 | 6 | 31 | - | TSS region | transcription start site region 1925 | |
Gm44198 | 6 | 2635 | + | unclassified gene | predicted gene, 44198 | |
Tssr61921 | 6 | 15 | - | TSS region | transcription start site region 61921 | |
Prokr1 | 6 | 12152 | - | protein coding gene | prokineticin receptor 1 | |
Tssr61922 | 6 | 13 | - | TSS region | transcription start site region 61922 | |
Cpgi17676 | 6 | 649 | CpG island | CpG island 17676 | ||
Gm34222 | 6 | 5943 | + | lncRNA gene | predicted gene, 34222 | |
Cpgi17677 | 6 | 635 | CpG island | CpG island 17677 | ||
Tssr61923 | 6 | 40 | - | TSS region | transcription start site region 61923 | |
Gm34312 | 6 | 1354 | + | lincRNA gene | predicted gene, 34312 | |
Aplf | 6 | 43769 | - | protein coding gene | aprataxin and PNKP like factor | |
Gm46964 | 6 | 2850 | + | lncRNA gene | predicted gene, 46964 | |
Gm38852 | 6 | 2611 | - | lncRNA gene | predicted gene, 38852 | |
Tssr57546 | 6 | 11 | + | TSS region | transcription start site region 57546 | |
Gm44097 | 6 | 6069 | + | antisense lncRNA gene | predicted gene, 44097 | |
Tssr57547 | 6 | 7 | + | TSS region | transcription start site region 57547 | |
Cpgi17678 | 6 | 353 | CpG island | CpG island 17678 | ||
Tssr61924 | 6 | 17 | - | TSS region | transcription start site region 61924 | |
Tssr61925 | 6 | 37 | - | TSS region | transcription start site region 61925 | |
Tssr61926 | 6 | 12 | - | TSS region | transcription start site region 61926 | |
1810020O05Rik | 6 | 15254 | - | lincRNA gene | Riken cDNA 1810020O05 gene | |
E230015B07Rik | 6 | 5262 | + | bidirectional promoter lncRNA gene | RIKEN cDNA E230015B07 gene | |
Tssr61927 | 6 | 33 | - | TSS region | transcription start site region 61927 | |
D6Mit228 | 6 | 105 | DNA segment | DNA segment, Chr 6, Massachusetts Institute of Technology 228 | ||
Tssr61928 | 6 | 14 | - | TSS region | transcription start site region 61928 | |
Tssr61929 | 6 | 19 | - | TSS region | transcription start site region 61929 | |
Tssr61930 | 6 | 15 | - | TSS region | transcription start site region 61930 | |
Gm44210 | 6 | 1184 | - | antisense lncRNA gene | predicted gene, 44210 | |
Cpgi17679 | 6 | 1667 | CpG island | CpG island 17679 | ||
Efcc1 | 6 | 25039 | + | protein coding gene | EF hand and coiled-coil domain containing 1 | |
Tssr61931 | 6 | 34 | - | TSS region | transcription start site region 61931 | |
Tssr61932 | 6 | 35 | - | TSS region | transcription start site region 61932 | |
Cpgi17680 | 6 | 806 | CpG island | CpG island 17680 | ||
Tssr57548 | 6 | 37 | + | TSS region | transcription start site region 57548 | |
Gm34414 | 6 | 8151 | - | lncRNA gene | predicted gene, 34414 | |
Tssr57549 | 6 | 13 | + | TSS region | transcription start site region 57549 | |
Tssr61933 | 6 | 11 | - | TSS region | transcription start site region 61933 | |
Tssr61934 | 6 | 27 | - | TSS region | transcription start site region 61934 | |
Gm5879 | 6 | 1208 | - | pseudogene | predicted gene 5879 | |
Tssr57550 | 6 | 20 | + | TSS region | transcription start site region 57550 | |
Gm43904 | 6 | 1337 | + | lincRNA gene | predicted gene, 43904 | |
Tssr57551 | 6 | 18 | + | TSS region | transcription start site region 57551 | |
Gp9 | 6 | 1696 | + | protein coding gene | glycoprotein 9 (platelet) | |
Tssr57552 | 6 | 28 | + | TSS region | transcription start site region 57552 | |
Rab43 | 6 | 23311 | - | protein coding gene | RAB43, member RAS oncogene family | |
Gm45140 | 6 | 46934 | - | protein coding gene | predicted gene 45140 | |
Tssr61935 | 6 | 10 | - | TSS region | transcription start site region 61935 | |
Tssr1926 | 6 | 15 | - | TSS region | transcription start site region 1926 | |
Gm44423 | 6 | 3157 | - | unclassified gene | predicted gene, 44423 | |
9930120I10Rik | 6 | 864 | - | unclassified gene | RIKEN cDNA 9930120I10 gene | |
Tssr61936 | 6 | 37 | - | TSS region | transcription start site region 61936 | |
Tssr61937 | 6 | 18 | - | TSS region | transcription start site region 61937 | |
Tssr61938 | 6 | 22 | - | TSS region | transcription start site region 61938 | |
Cpgi17681 | 6 | 1701 | CpG island | CpG island 17681 | ||
Tssr57553 | 6 | 15 | + | TSS region | transcription start site region 57553 | |
Tssr61939 | 6 | 15 | - | TSS region | transcription start site region 61939 | |
Tssr61940 | 6 | 31 | - | TSS region | transcription start site region 61940 | |
Tssr61941 | 6 | 32 | - | TSS region | transcription start site region 61941 | |
Isy1 | 6 | 20312 | - | protein coding gene | ISY1 splicing factor homolog |