Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:86613188-86715551

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm46963 6 86604421 to 86627858 23437 + protein coding gene predicted gene, 46963
Tssr1920 6 86615605 to 86615651 46 + TSS region transcription start site region 1920
Tssr1921 6 86616736 to 86616743 7 - TSS region transcription start site region 1921
Tssr61826 6 86620088 to 86620104 16 - TSS region transcription start site region 61826
Asprv1 6 86628174 to 86629710 1536 + protein coding gene aspartic peptidase, retroviral-like 1
Tssr57496 6 86628189 to 86628208 19 + TSS region transcription start site region 57496
Tssr57497 6 86628225 to 86628241 16 + TSS region transcription start site region 57497
Mxd1 6 86647042 to 86669161 22119 - protein coding gene MAX dimerization protein 1
Tssr61827 6 86649039 to 86649042 3 - TSS region transcription start site region 61827
Tssr61828 6 86649426 to 86649429 3 - TSS region transcription start site region 61828
Tssr61829 6 86649929 to 86649982 53 - TSS region transcription start site region 61829
Tssr61830 6 86650160 to 86650173 13 - TSS region transcription start site region 61830
Gm38850 6 86653954 to 86663064 9110 - lncRNA gene predicted gene, 38850
Gm44292 6 86663188 to 86665551 2363 - unclassified gene predicted gene, 44292
Cpgi17667 6 86668487 to 86669782 1295 CpG island CpG island 17667
Tssr57498 6 86668801 to 86668806 5 + TSS region transcription start site region 57498
Tssr57499 6 86668809 to 86668818 9 + TSS region transcription start site region 57499
Tssr57500 6 86668822 to 86668827 5 + TSS region transcription start site region 57500
Tssr57501 6 86668863 to 86668906 43 + TSS region transcription start site region 57501
Tssr57502 6 86668929 to 86668935 6 + TSS region transcription start site region 57502
Tssr61831 6 86669110 to 86669125 15 - TSS region transcription start site region 61831
Tssr61832 6 86669136 to 86669164 28 - TSS region transcription start site region 61832
Tssr57503 6 86669607 to 86669646 39 + TSS region transcription start site region 57503
Snrnp27 6 86675169 to 86684491 9322 - protein coding gene small nuclear ribonucleoprotein 27 (U4/U6.U5)
Cpgi17668 6 86684136 to 86684687 551 CpG island CpG island 17668
Tssr61833 6 86684481 to 86684508 27 - TSS region transcription start site region 61833
Tssr61834 6 86684510 to 86684529 19 - TSS region transcription start site region 61834
Gm44214 6 86687823 to 86688428 605 - lincRNA gene predicted gene, 44214
Gmcl1 6 86691768 to 86733383 41615 - protein coding gene germ cell-less, spermatogenesis associated 1
Tssr61835 6 86704722 to 86704768 46 - TSS region transcription start site region 61835