Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Cia6 | 6 | 82961150 | QTL | collagen induced arthritis QTL 6 | ||
Pgia19 | 6 | 42111975 | QTL | proteoglycan induced arthritis 19 | ||
Gm46963 | 6 | 23437 | + | protein coding gene | predicted gene, 46963 | |
Tssr61824 | 6 | 11 | - | TSS region | transcription start site region 61824 | |
Tssr61825 | 6 | 21 | - | TSS region | transcription start site region 61825 | |
Tssr57494 | 6 | 11 | + | TSS region | transcription start site region 57494 | |
Tssr57495 | 6 | 12 | + | TSS region | transcription start site region 57495 | |
Tssr1920 | 6 | 46 | + | TSS region | transcription start site region 1920 | |
Tssr1921 | 6 | 7 | - | TSS region | transcription start site region 1921 | |
Tssr61826 | 6 | 16 | - | TSS region | transcription start site region 61826 | |
Asprv1 | 6 | 1536 | + | protein coding gene | aspartic peptidase, retroviral-like 1 | |
Tssr57496 | 6 | 19 | + | TSS region | transcription start site region 57496 | |
Tssr57497 | 6 | 16 | + | TSS region | transcription start site region 57497 | |
Mxd1 | 6 | 22119 | - | protein coding gene | MAX dimerization protein 1 | |
Tssr61827 | 6 | 3 | - | TSS region | transcription start site region 61827 | |
Tssr61828 | 6 | 3 | - | TSS region | transcription start site region 61828 | |
Tssr61829 | 6 | 53 | - | TSS region | transcription start site region 61829 | |
Tssr61830 | 6 | 13 | - | TSS region | transcription start site region 61830 | |
Gm38850 | 6 | 9110 | - | lncRNA gene | predicted gene, 38850 | |
Gm44292 | 6 | 2363 | - | unclassified gene | predicted gene, 44292 | |
Cpgi17667 | 6 | 1295 | CpG island | CpG island 17667 | ||
Tssr57498 | 6 | 5 | + | TSS region | transcription start site region 57498 | |
Tssr57499 | 6 | 9 | + | TSS region | transcription start site region 57499 | |
Tssr57500 | 6 | 5 | + | TSS region | transcription start site region 57500 | |
Tssr57501 | 6 | 43 | + | TSS region | transcription start site region 57501 | |
Tssr57502 | 6 | 6 | + | TSS region | transcription start site region 57502 | |
Tssr61831 | 6 | 15 | - | TSS region | transcription start site region 61831 | |
Tssr61832 | 6 | 28 | - | TSS region | transcription start site region 61832 | |
Tssr57503 | 6 | 39 | + | TSS region | transcription start site region 57503 | |
Snrnp27 | 6 | 9322 | - | protein coding gene | small nuclear ribonucleoprotein 27 (U4/U6.U5) | |
Cpgi17668 | 6 | 551 | CpG island | CpG island 17668 | ||
Tssr61833 | 6 | 27 | - | TSS region | transcription start site region 61833 | |
Tssr61834 | 6 | 19 | - | TSS region | transcription start site region 61834 | |
Gm44214 | 6 | 605 | - | lincRNA gene | predicted gene, 44214 | |
Gmcl1 | 6 | 41615 | - | protein coding gene | germ cell-less, spermatogenesis associated 1 | |
Tssr61835 | 6 | 46 | - | TSS region | transcription start site region 61835 | |
Cpgi17669 | 6 | 1411 | CpG island | CpG island 17669 | ||
Tssr61836 | 6 | 38 | - | TSS region | transcription start site region 61836 | |
Tssr61837 | 6 | 126 | - | TSS region | transcription start site region 61837 | |
Gm44036 | 6 | 3576 | + | lincRNA gene | predicted gene, 44036 | |
Tssr57504 | 6 | 23 | + | TSS region | transcription start site region 57504 | |
Anxa4 | 6 | 56744 | - | protein coding gene | annexin A4 | |
Tssr61838 | 6 | 12 | - | TSS region | transcription start site region 61838 | |
Tssr61839 | 6 | 3 | - | TSS region | transcription start site region 61839 | |
Tssr61840 | 6 | 14 | - | TSS region | transcription start site region 61840 | |
Tssr61841 | 6 | 11 | - | TSS region | transcription start site region 61841 | |
Tssr61842 | 6 | 12 | - | TSS region | transcription start site region 61842 | |
Tssr61843 | 6 | 33 | - | TSS region | transcription start site region 61843 | |
Tssr61844 | 6 | 32 | - | TSS region | transcription start site region 61844 | |
Tssr57505 | 6 | 32 | + | TSS region | transcription start site region 57505 | |
Tssr61845 | 6 | 12 | - | TSS region | transcription start site region 61845 | |
Tssr61846 | 6 | 13 | - | TSS region | transcription start site region 61846 | |
Tssr61847 | 6 | 6 | - | TSS region | transcription start site region 61847 | |
Tssr61848 | 6 | 16 | - | TSS region | transcription start site region 61848 | |
Tssr61849 | 6 | 2 | - | TSS region | transcription start site region 61849 | |
Tssr1922 | 6 | 6 | - | TSS region | transcription start site region 1922 | |
Tssr61850 | 6 | 25 | - | TSS region | transcription start site region 61850 | |
Tssr61851 | 6 | 55 | - | TSS region | transcription start site region 61851 | |
Tssr61852 | 6 | 42 | - | TSS region | transcription start site region 61852 | |
Tssr61853 | 6 | 27 | - | TSS region | transcription start site region 61853 | |
Tssr61854 | 6 | 16 | - | TSS region | transcription start site region 61854 | |
Tssr61855 | 6 | 22 | - | TSS region | transcription start site region 61855 | |
Tssr61856 | 6 | 9 | - | TSS region | transcription start site region 61856 | |
Tssr61857 | 6 | 29 | - | TSS region | transcription start site region 61857 | |
Tssr61858 | 6 | 10 | - | TSS region | transcription start site region 61858 | |
Tssr61859 | 6 | 15 | - | TSS region | transcription start site region 61859 | |
Tssr57506 | 6 | 20 | + | TSS region | transcription start site region 57506 | |
Tssr57507 | 6 | 13 | + | TSS region | transcription start site region 57507 | |
Tssr61860 | 6 | 13 | - | TSS region | transcription start site region 61860 | |
Tssr61861 | 6 | 12 | - | TSS region | transcription start site region 61861 | |
Tssr61862 | 6 | 47 | - | TSS region | transcription start site region 61862 | |
Tssr61863 | 6 | 4 | - | TSS region | transcription start site region 61863 | |
Tssr57508 | 6 | 13 | + | TSS region | transcription start site region 57508 | |
Cpgi17670 | 6 | 941 | CpG island | CpG island 17670 | ||
Tssr61864 | 6 | 60 | - | TSS region | transcription start site region 61864 | |
Tssr61865 | 6 | 11 | - | TSS region | transcription start site region 61865 | |
Tssr61866 | 6 | 41 | - | TSS region | transcription start site region 61866 | |
Tssr61867 | 6 | 17 | - | TSS region | transcription start site region 61867 | |
D6Mit29 | 6 | 122 | DNA segment | DNA segment, Chr 6, Massachusetts Institute of Technology 29 | ||
D6Dcr21 | 6 | 98 | DNA segment | DNA Segment, Chr 6, Derry C. Roopenian 21 | ||
2610306M01Rik | 6 | 1033 | - | bidirectional promoter lncRNA gene | RIKEN cDNA 2610306M01 gene | |
Cpgi17671 | 6 | 1670 | CpG island | CpG island 17671 | ||
Tssr57509 | 6 | 69 | + | TSS region | transcription start site region 57509 | |
Tssr57510 | 6 | 11 | + | TSS region | transcription start site region 57510 | |
Tssr57511 | 6 | 106 | + | TSS region | transcription start site region 57511 | |
Aak1 | 6 | 153706 | + | protein coding gene | AP2 associated kinase 1 | |
Tssr57512 | 6 | 18 | + | TSS region | transcription start site region 57512 | |
Tssr57513 | 6 | 11 | + | TSS region | transcription start site region 57513 | |
Gm44153 | 6 | 1579 | + | unclassified gene | predicted gene, 44153 | |
Tssr57514 | 6 | 4 | + | TSS region | transcription start site region 57514 | |
Tssr57515 | 6 | 3 | + | TSS region | transcription start site region 57515 | |
Gm44152 | 6 | 1690 | + | unclassified gene | predicted gene, 44152 | |
D6Mit323 | 6 | 123 | DNA segment | DNA Segment, Chr 6, Massachusetts Institute of Technology 323 | ||
Tssr57516 | 6 | 8 | + | TSS region | transcription start site region 57516 | |
Tssr57517 | 6 | 23 | + | TSS region | transcription start site region 57517 | |
Tssr57518 | 6 | 23 | + | TSS region | transcription start site region 57518 | |
Tssr57519 | 6 | 25 | + | TSS region | transcription start site region 57519 | |
Tssr57520 | 6 | 37 | + | TSS region | transcription start site region 57520 | |
Tssr57521 | 6 | 7 | + | TSS region | transcription start site region 57521 | |
Gm44093 | 6 | 1801 | + | unclassified gene | predicted gene, 44093 | |
Gm44091 | 6 | 648 | + | sense intronic lncRNA gene | predicted gene, 44091 | |
Gm38495 | 6 | 8250 | + | protein coding gene | predicted gene, 38495 | |
Tssr57522 | 6 | 23 | + | TSS region | transcription start site region 57522 | |
Nfu1 | 6 | 19170 | + | protein coding gene | NFU1 iron-sulfur cluster scaffold | |
Cpgi17672 | 6 | 628 | CpG island | CpG island 17672 | ||
Tssr57523 | 6 | 21 | + | TSS region | transcription start site region 57523 | |
Tssr57524 | 6 | 13 | + | TSS region | transcription start site region 57524 | |
Tssr57525 | 6 | 20 | + | TSS region | transcription start site region 57525 | |
Cpgi17673 | 6 | 1176 | CpG island | CpG island 17673 | ||
Tssr57526 | 6 | 80 | + | TSS region | transcription start site region 57526 | |
Gfpt1 | 6 | 49351 | + | protein coding gene | glutamine fructose-6-phosphate transaminase 1 | |
Tssr57527 | 6 | 11 | + | TSS region | transcription start site region 57527 | |
Tssr57528 | 6 | 11 | + | TSS region | transcription start site region 57528 | |
Tssr57529 | 6 | 11 | + | TSS region | transcription start site region 57529 | |
Tssr57530 | 6 | 32 | + | TSS region | transcription start site region 57530 | |
Tssr57531 | 6 | 8 | + | TSS region | transcription start site region 57531 | |
D6Ertd527e | 6 | 8251 | + | protein coding gene | DNA segment, Chr 6, ERATO Doi 527, expressed | |
Gm40382 | 6 | 5694 | - | lncRNA gene | predicted gene, 40382 | |
Antxr1 | 6 | 201956 | - | protein coding gene | anthrax toxin receptor 1 | |
Tssr61868 | 6 | 12 | - | TSS region | transcription start site region 61868 | |
Gm44415 | 6 | 2111 | - | unclassified gene | predicted gene, 44415 | |
Gm44416 | 6 | 2065 | - | unclassified gene | predicted gene, 44416 | |
Tssr61869 | 6 | 2 | - | TSS region | transcription start site region 61869 | |
Tssr61870 | 6 | 12 | - | TSS region | transcription start site region 61870 | |
Tssr57532 | 6 | 6 | + | TSS region | transcription start site region 57532 | |
Tssr61871 | 6 | 12 | - | TSS region | transcription start site region 61871 | |
Gm38851 | 6 | 46197 | + | lncRNA gene | predicted gene, 38851 | |
Tssr61872 | 6 | 16 | - | TSS region | transcription start site region 61872 | |
Tssr61873 | 6 | 15 | - | TSS region | transcription start site region 61873 | |
Gm44417 | 6 | 3358 | - | unclassified gene | predicted gene, 44417 | |
Tssr61874 | 6 | 38 | - | TSS region | transcription start site region 61874 | |
Tssr57533 | 6 | 29 | + | TSS region | transcription start site region 57533 | |
Tssr57534 | 6 | 12 | + | TSS region | transcription start site region 57534 | |
Gm44418 | 6 | 2005 | + | antisense lncRNA gene | predicted gene, 44418 | |
n-R5s164 | 6 | 111 | + | rRNA gene | nuclear encoded rRNA 5S 164 | |
Gm34170 | 6 | 2679 | + | lncRNA gene | predicted gene, 34170 | |
Tssr61875 | 6 | 51 | - | TSS region | transcription start site region 61875 | |
Tssr61876 | 6 | 14 | - | TSS region | transcription start site region 61876 | |
Cpgi17674 | 6 | 276 | CpG island | CpG island 17674 | ||
9530013L04Rik | 6 | 781 | - | unclassified gene | RIKEN cDNA 9530013L04 gene | |
Gm34090 | 6 | 8969 | - | lncRNA gene | predicted gene, 34090 | |
Gm44414 | 6 | 2108 | - | unclassified gene | predicted gene, 44414 | |
Cpgi17675 | 6 | 637 | CpG island | CpG island 17675 | ||
Tssr61877 | 6 | 9 | - | TSS region | transcription start site region 61877 | |
Tssr61878 | 6 | 15 | - | TSS region | transcription start site region 61878 | |
Tssr61879 | 6 | 26 | - | TSS region | transcription start site region 61879 | |
Tssr61880 | 6 | 7 | - | TSS region | transcription start site region 61880 | |
Tssr61881 | 6 | 17 | - | TSS region | transcription start site region 61881 | |
Tssr61882 | 6 | 29 | - | TSS region | transcription start site region 61882 | |
Tssr61883 | 6 | 11 | - | TSS region | transcription start site region 61883 | |
Gkn1 | 6 | 5262 | - | protein coding gene | gastrokine 1 | |
Tssr1923 | 6 | 7 | - | TSS region | transcription start site region 1923 | |
Tssr61884 | 6 | 19 | - | TSS region | transcription start site region 61884 | |
Tssr57535 | 6 | 5 | + | TSS region | transcription start site region 57535 | |
Tssr61885 | 6 | 30 | - | TSS region | transcription start site region 61885 | |
Tssr61886 | 6 | 17 | - | TSS region | transcription start site region 61886 | |
Tssr57536 | 6 | 13 | + | TSS region | transcription start site region 57536 | |
Gkn2 | 6 | 6129 | + | protein coding gene | gastrokine 2 | |
Tssr57537 | 6 | 18 | + | TSS region | transcription start site region 57537 | |
Tssr57538 | 6 | 8 | + | TSS region | transcription start site region 57538 | |
Tssr57539 | 6 | 14 | + | TSS region | transcription start site region 57539 | |
Tssr57540 | 6 | 14 | + | TSS region | transcription start site region 57540 | |
Tssr61887 | 6 | 38 | - | TSS region | transcription start site region 61887 | |
Tssr57541 | 6 | 7 | + | TSS region | transcription start site region 57541 | |
Tssr1924 | 6 | 6 | + | TSS region | transcription start site region 1924 | |
Tssr57542 | 6 | 11 | + | TSS region | transcription start site region 57542 | |
Tssr61888 | 6 | 35 | - | TSS region | transcription start site region 61888 | |
Gkn3 | 6 | 5616 | - | protein coding gene | gastrokine 3 | |
Tssr61889 | 6 | 16 | - | TSS region | transcription start site region 61889 | |
Tssr61890 | 6 | 14 | - | TSS region | transcription start site region 61890 | |
Bits2 | 6 | 136 | QTL | bitterness sensitivity 2 | ||
D6Mit9 | 6 | 136 | DNA segment | DNA segment, Chr 6, Massachusetts Institute of Technology 9 | ||
Egrm2 | 6 | 136 | QTL | early growth rate, maternal effect 2 | ||
Skl3 | 6 | 136 | QTL | skeletal size (tail length) 3 | ||
Tssr57543 | 6 | 14 | + | TSS region | transcription start site region 57543 | |
Bmp10 | 6 | 5518 | + | protein coding gene | bone morphogenetic protein 10 | |
Tssr57544 | 6 | 11 | + | TSS region | transcription start site region 57544 | |
Tssr61891 | 6 | 26 | - | TSS region | transcription start site region 61891 | |
Tssr61892 | 6 | 13 | - | TSS region | transcription start site region 61892 | |
Arhgap25 | 6 | 74714 | - | protein coding gene | Rho GTPase activating protein 25 | |
Tssr61893 | 6 | 14 | - | TSS region | transcription start site region 61893 | |
Tssr61894 | 6 | 24 | - | TSS region | transcription start site region 61894 | |
Tssr61895 | 6 | 9 | - | TSS region | transcription start site region 61895 | |
Tssr61896 | 6 | 40 | - | TSS region | transcription start site region 61896 | |
Tssr61897 | 6 | 26 | - | TSS region | transcription start site region 61897 | |
Tssr61898 | 6 | 11 | - | TSS region | transcription start site region 61898 | |
Tssr61899 | 6 | 12 | - | TSS region | transcription start site region 61899 | |
Tssr61900 | 6 | 33 | - | TSS region | transcription start site region 61900 | |
Tssr61901 | 6 | 53 | - | TSS region | transcription start site region 61901 | |
Tssr57545 | 6 | 26 | + | TSS region | transcription start site region 57545 | |
Tssr61902 | 6 | 19 | - | TSS region | transcription start site region 61902 | |
Tssr61903 | 6 | 11 | - | TSS region | transcription start site region 61903 | |
Tssr61904 | 6 | 27 | - | TSS region | transcription start site region 61904 | |
Tssr61905 | 6 | 24 | - | TSS region | transcription start site region 61905 | |
Tssr61906 | 6 | 24 | - | TSS region | transcription start site region 61906 | |
Tssr61907 | 6 | 13 | - | TSS region | transcription start site region 61907 | |
Tssr61908 | 6 | 12 | - | TSS region | transcription start site region 61908 | |
Tssr61909 | 6 | 20 | - | TSS region | transcription start site region 61909 | |
Tssr61910 | 6 | 7 | - | TSS region | transcription start site region 61910 | |
D6Mit213 | 6 | 143 | DNA segment | DNA segment, Chr 6, Massachusetts Institute of Technology 213 |