Gene symbol |
Chromo- some |
Coordinates (bp, mm10) |
Size (bp) |
Strand |
Feature Type |
Gene name |
---|---|---|---|---|---|---|
Cia6 | 6 | 82961150 | QTL | collagen induced arthritis QTL 6 | ||
Pgia19 | 6 | 42111975 | QTL | proteoglycan induced arthritis 19 | ||
Tia1 | 6 | 29186 | + | protein coding gene | cytotoxic granule-associated RNA binding protein 1 | |
Gm44790 | 6 | 18972 | + | protein coding gene | predicted gene 44790 | |
C87436 | 6 | 33060 | + | protein coding gene | expressed sequence C87436 | |
Cpgi17664 | 6 | 1073 | CpG island | CpG island 17664 | ||
Tssr57468 | 6 | 45 | + | TSS region | transcription start site region 57468 | |
Tssr57469 | 6 | 16 | + | TSS region | transcription start site region 57469 | |
Tssr61792 | 6 | 18 | - | TSS region | transcription start site region 61792 | |
Tssr57470 | 6 | 47 | + | TSS region | transcription start site region 57470 | |
Tssr57471 | 6 | 13 | + | TSS region | transcription start site region 57471 | |
Tssr57472 | 6 | 10 | + | TSS region | transcription start site region 57472 | |
Tssr57473 | 6 | 13 | + | TSS region | transcription start site region 57473 | |
Tssr57474 | 6 | 44 | + | TSS region | transcription start site region 57474 | |
A430078I02Rik | 6 | 10553 | - | antisense lncRNA gene | RIKEN cDNA A430078I02 gene | |
Cpgi17665 | 6 | 1011 | CpG island | CpG island 17665 | ||
Tssr61793 | 6 | 11 | - | TSS region | transcription start site region 61793 | |
Tssr61794 | 6 | 46 | - | TSS region | transcription start site region 61794 | |
Tssr57475 | 6 | 43 | + | TSS region | transcription start site region 57475 | |
Tssr57476 | 6 | 14 | + | TSS region | transcription start site region 57476 | |
Gm38849 | 6 | 602 | + | lncRNA gene | predicted gene, 38849 | |
2310040G24Rik | 6 | 4851 | - | lincRNA gene | RIKEN cDNA 2310040G24 gene | |
Tssr61795 | 6 | 5 | - | TSS region | transcription start site region 61795 | |
Tssr57477 | 6 | 51 | + | TSS region | transcription start site region 57477 | |
Tssr57478 | 6 | 13 | + | TSS region | transcription start site region 57478 | |
Tssr61796 | 6 | 12 | - | TSS region | transcription start site region 61796 | |
Tssr61797 | 6 | 71 | - | TSS region | transcription start site region 61797 | |
Tssr61798 | 6 | 11 | - | TSS region | transcription start site region 61798 | |
Tssr61799 | 6 | 29 | - | TSS region | transcription start site region 61799 | |
Tssr61800 | 6 | 21 | - | TSS region | transcription start site region 61800 | |
Gm43936 | 6 | 693 | - | lincRNA gene | predicted gene, 43936 | |
Tssr61801 | 6 | 7 | - | TSS region | transcription start site region 61801 | |
Gm28720 | 6 | 3155 | + | lincRNA gene | predicted gene 28720 | |
Tssr61802 | 6 | 12 | - | TSS region | transcription start site region 61802 | |
Gm28719 | 6 | 1756 | + | lincRNA gene | predicted gene 28719 | |
Gm44386 | 6 | 2382 | - | lincRNA gene | predicted gene, 44386 | |
Tssr61803 | 6 | 33 | - | TSS region | transcription start site region 61803 | |
Tssr61804 | 6 | 20 | - | TSS region | transcription start site region 61804 | |
Tssr61805 | 6 | 22 | - | TSS region | transcription start site region 61805 | |
Tssr61806 | 6 | 13 | - | TSS region | transcription start site region 61806 | |
Pcbp1 | 6 | 1677 | - | protein coding gene | poly(rC) binding protein 1 | |
Cpgi17666 | 6 | 2502 | CpG island | CpG island 17666 | ||
Tssr57479 | 6 | 79 | + | TSS region | transcription start site region 57479 | |
Tssr61807 | 6 | 11 | - | TSS region | transcription start site region 61807 | |
Tssr57480 | 6 | 25 | + | TSS region | transcription start site region 57480 | |
Tssr57481 | 6 | 26 | + | TSS region | transcription start site region 57481 | |
Tssr61808 | 6 | 11 | - | TSS region | transcription start site region 61808 | |
Tssr57482 | 6 | 17 | + | TSS region | transcription start site region 57482 | |
Tssr61809 | 6 | 11 | - | TSS region | transcription start site region 61809 | |
Tssr61810 | 6 | 11 | - | TSS region | transcription start site region 61810 | |
Tssr61811 | 6 | 23 | - | TSS region | transcription start site region 61811 | |
Tssr61812 | 6 | 11 | - | TSS region | transcription start site region 61812 | |
Tssr57483 | 6 | 24 | + | TSS region | transcription start site region 57483 | |
Tssr61813 | 6 | 67 | - | TSS region | transcription start site region 61813 | |
Tssr57484 | 6 | 75 | + | TSS region | transcription start site region 57484 | |
Tssr57485 | 6 | 60 | + | TSS region | transcription start site region 57485 | |
Tssr57486 | 6 | 12 | + | TSS region | transcription start site region 57486 | |
1600020E01Rik | 6 | 37119 | + | antisense lncRNA gene | RIKEN cDNA 1600020E01 gene | |
Gm38676 | 6 | 2445 | + | lncRNA gene | predicted gene, 38676 | |
Tssr57487 | 6 | 4 | + | TSS region | transcription start site region 57487 | |
Tssr57488 | 6 | 50 | + | TSS region | transcription start site region 57488 | |
Tssr61814 | 6 | 23 | - | TSS region | transcription start site region 61814 | |
Tssr61815 | 6 | 14 | - | TSS region | transcription start site region 61815 | |
Tssr57489 | 6 | 14 | + | TSS region | transcription start site region 57489 | |
Tssr57490 | 6 | 16 | + | TSS region | transcription start site region 57490 | |
Gm22184 | 6 | 61 | - | miRNA gene | predicted gene, 22184 | |
Tssr57491 | 6 | 11 | + | TSS region | transcription start site region 57491 | |
Tssr61816 | 6 | 1 | - | TSS region | transcription start site region 61816 | |
Tssr61817 | 6 | 5 | - | TSS region | transcription start site region 61817 | |
Gm44369 | 6 | 2174 | + | unclassified gene | predicted gene, 44369 | |
Tssr61818 | 6 | 7 | - | TSS region | transcription start site region 61818 | |
Tssr57492 | 6 | 17 | + | TSS region | transcription start site region 57492 | |
Tssr1917 | 6 | 15 | - | TSS region | transcription start site region 1917 | |
Gm46963 | 6 | 23437 | + | protein coding gene | predicted gene, 46963 | |
Tssr1918 | 6 | 40 | + | TSS region | transcription start site region 1918 | |
Tssr61819 | 6 | 8 | - | TSS region | transcription start site region 61819 | |
Tssr61820 | 6 | 12 | - | TSS region | transcription start site region 61820 | |
Tssr61821 | 6 | 6 | - | TSS region | transcription start site region 61821 | |
Tssr61822 | 6 | 18 | - | TSS region | transcription start site region 61822 | |
Tssr61823 | 6 | 27 | - | TSS region | transcription start site region 61823 | |
Tssr1919 | 6 | 7 | + | TSS region | transcription start site region 1919 | |
Tssr57493 | 6 | 9 | + | TSS region | transcription start site region 57493 | |
Tssr61824 | 6 | 11 | - | TSS region | transcription start site region 61824 | |
Tssr61825 | 6 | 21 | - | TSS region | transcription start site region 61825 | |
Tssr57494 | 6 | 11 | + | TSS region | transcription start site region 57494 | |
Tssr57495 | 6 | 12 | + | TSS region | transcription start site region 57495 | |
Tssr1920 | 6 | 46 | + | TSS region | transcription start site region 1920 | |
Tssr1921 | 6 | 7 | - | TSS region | transcription start site region 1921 | |
Tssr61826 | 6 | 16 | - | TSS region | transcription start site region 61826 | |
Asprv1 | 6 | 1536 | + | protein coding gene | aspartic peptidase, retroviral-like 1 | |
Tssr57496 | 6 | 19 | + | TSS region | transcription start site region 57496 | |
Tssr57497 | 6 | 16 | + | TSS region | transcription start site region 57497 | |
Mxd1 | 6 | 22119 | - | protein coding gene | MAX dimerization protein 1 | |
Tssr61827 | 6 | 3 | - | TSS region | transcription start site region 61827 | |
Tssr61828 | 6 | 3 | - | TSS region | transcription start site region 61828 | |
Tssr61829 | 6 | 53 | - | TSS region | transcription start site region 61829 | |
Tssr61830 | 6 | 13 | - | TSS region | transcription start site region 61830 | |
Gm38850 | 6 | 9110 | - | lncRNA gene | predicted gene, 38850 | |
Gm44292 | 6 | 2363 | - | unclassified gene | predicted gene, 44292 | |
Cpgi17667 | 6 | 1295 | CpG island | CpG island 17667 | ||
Tssr57498 | 6 | 5 | + | TSS region | transcription start site region 57498 | |
Tssr57499 | 6 | 9 | + | TSS region | transcription start site region 57499 | |
Tssr57500 | 6 | 5 | + | TSS region | transcription start site region 57500 | |
Tssr57501 | 6 | 43 | + | TSS region | transcription start site region 57501 | |
Tssr57502 | 6 | 6 | + | TSS region | transcription start site region 57502 | |
Tssr61831 | 6 | 15 | - | TSS region | transcription start site region 61831 | |
Tssr61832 | 6 | 28 | - | TSS region | transcription start site region 61832 | |
Tssr57503 | 6 | 39 | + | TSS region | transcription start site region 57503 | |
Snrnp27 | 6 | 9322 | - | protein coding gene | small nuclear ribonucleoprotein 27 (U4/U6.U5) | |
Cpgi17668 | 6 | 551 | CpG island | CpG island 17668 | ||
Tssr61833 | 6 | 27 | - | TSS region | transcription start site region 61833 | |
Tssr61834 | 6 | 19 | - | TSS region | transcription start site region 61834 | |
Gm44214 | 6 | 605 | - | lincRNA gene | predicted gene, 44214 | |
Gmcl1 | 6 | 41615 | - | protein coding gene | germ cell-less, spermatogenesis associated 1 | |
Tssr61835 | 6 | 46 | - | TSS region | transcription start site region 61835 | |
Cpgi17669 | 6 | 1411 | CpG island | CpG island 17669 | ||
Tssr61836 | 6 | 38 | - | TSS region | transcription start site region 61836 | |
Tssr61837 | 6 | 126 | - | TSS region | transcription start site region 61837 | |
Gm44036 | 6 | 3576 | + | lincRNA gene | predicted gene, 44036 | |
Tssr57504 | 6 | 23 | + | TSS region | transcription start site region 57504 | |
Anxa4 | 6 | 56744 | - | protein coding gene | annexin A4 | |
Tssr61838 | 6 | 12 | - | TSS region | transcription start site region 61838 | |
Tssr61839 | 6 | 3 | - | TSS region | transcription start site region 61839 | |
Tssr61840 | 6 | 14 | - | TSS region | transcription start site region 61840 | |
Tssr61841 | 6 | 11 | - | TSS region | transcription start site region 61841 | |
Tssr61842 | 6 | 12 | - | TSS region | transcription start site region 61842 | |
Tssr61843 | 6 | 33 | - | TSS region | transcription start site region 61843 | |
Tssr61844 | 6 | 32 | - | TSS region | transcription start site region 61844 | |
Tssr57505 | 6 | 32 | + | TSS region | transcription start site region 57505 | |
Tssr61845 | 6 | 12 | - | TSS region | transcription start site region 61845 | |
Tssr61846 | 6 | 13 | - | TSS region | transcription start site region 61846 | |
Tssr61847 | 6 | 6 | - | TSS region | transcription start site region 61847 | |
Tssr61848 | 6 | 16 | - | TSS region | transcription start site region 61848 | |
Tssr61849 | 6 | 2 | - | TSS region | transcription start site region 61849 | |
Tssr1922 | 6 | 6 | - | TSS region | transcription start site region 1922 | |
Tssr61850 | 6 | 25 | - | TSS region | transcription start site region 61850 | |
Tssr61851 | 6 | 55 | - | TSS region | transcription start site region 61851 | |
Tssr61852 | 6 | 42 | - | TSS region | transcription start site region 61852 | |
Tssr61853 | 6 | 27 | - | TSS region | transcription start site region 61853 | |
Tssr61854 | 6 | 16 | - | TSS region | transcription start site region 61854 | |
Tssr61855 | 6 | 22 | - | TSS region | transcription start site region 61855 | |
Tssr61856 | 6 | 9 | - | TSS region | transcription start site region 61856 | |
Tssr61857 | 6 | 29 | - | TSS region | transcription start site region 61857 | |
Tssr61858 | 6 | 10 | - | TSS region | transcription start site region 61858 | |
Tssr61859 | 6 | 15 | - | TSS region | transcription start site region 61859 | |
Tssr57506 | 6 | 20 | + | TSS region | transcription start site region 57506 | |
Tssr57507 | 6 | 13 | + | TSS region | transcription start site region 57507 | |
Tssr61860 | 6 | 13 | - | TSS region | transcription start site region 61860 | |
Tssr61861 | 6 | 12 | - | TSS region | transcription start site region 61861 | |
Tssr61862 | 6 | 47 | - | TSS region | transcription start site region 61862 | |
Tssr61863 | 6 | 4 | - | TSS region | transcription start site region 61863 | |
Tssr57508 | 6 | 13 | + | TSS region | transcription start site region 57508 | |
Cpgi17670 | 6 | 941 | CpG island | CpG island 17670 | ||
Tssr61864 | 6 | 60 | - | TSS region | transcription start site region 61864 | |
Tssr61865 | 6 | 11 | - | TSS region | transcription start site region 61865 | |
Tssr61866 | 6 | 41 | - | TSS region | transcription start site region 61866 | |
Tssr61867 | 6 | 17 | - | TSS region | transcription start site region 61867 | |
D6Mit29 | 6 | 122 | DNA segment | DNA segment, Chr 6, Massachusetts Institute of Technology 29 | ||
D6Dcr21 | 6 | 98 | DNA segment | DNA Segment, Chr 6, Derry C. Roopenian 21 | ||
2610306M01Rik | 6 | 1033 | - | bidirectional promoter lncRNA gene | RIKEN cDNA 2610306M01 gene | |
Cpgi17671 | 6 | 1670 | CpG island | CpG island 17671 | ||
Tssr57509 | 6 | 69 | + | TSS region | transcription start site region 57509 | |
Tssr57510 | 6 | 11 | + | TSS region | transcription start site region 57510 | |
Tssr57511 | 6 | 106 | + | TSS region | transcription start site region 57511 | |
Aak1 | 6 | 153706 | + | protein coding gene | AP2 associated kinase 1 | |
Tssr57512 | 6 | 18 | + | TSS region | transcription start site region 57512 | |
Tssr57513 | 6 | 11 | + | TSS region | transcription start site region 57513 | |
Gm44153 | 6 | 1579 | + | unclassified gene | predicted gene, 44153 | |
Tssr57514 | 6 | 4 | + | TSS region | transcription start site region 57514 | |
Tssr57515 | 6 | 3 | + | TSS region | transcription start site region 57515 | |
Gm44152 | 6 | 1690 | + | unclassified gene | predicted gene, 44152 | |
D6Mit323 | 6 | 123 | DNA segment | DNA Segment, Chr 6, Massachusetts Institute of Technology 323 | ||
Tssr57516 | 6 | 8 | + | TSS region | transcription start site region 57516 | |
Tssr57517 | 6 | 23 | + | TSS region | transcription start site region 57517 | |
Tssr57518 | 6 | 23 | + | TSS region | transcription start site region 57518 | |
Tssr57519 | 6 | 25 | + | TSS region | transcription start site region 57519 | |
Tssr57520 | 6 | 37 | + | TSS region | transcription start site region 57520 | |
Tssr57521 | 6 | 7 | + | TSS region | transcription start site region 57521 | |
Gm44093 | 6 | 1801 | + | unclassified gene | predicted gene, 44093 | |
Gm44091 | 6 | 648 | + | sense intronic lncRNA gene | predicted gene, 44091 | |
Gm38495 | 6 | 8250 | + | protein coding gene | predicted gene, 38495 | |
Tssr57522 | 6 | 23 | + | TSS region | transcription start site region 57522 | |
Nfu1 | 6 | 19170 | + | protein coding gene | NFU1 iron-sulfur cluster scaffold | |
Cpgi17672 | 6 | 628 | CpG island | CpG island 17672 | ||
Tssr57523 | 6 | 21 | + | TSS region | transcription start site region 57523 | |
Tssr57524 | 6 | 13 | + | TSS region | transcription start site region 57524 | |
Tssr57525 | 6 | 20 | + | TSS region | transcription start site region 57525 | |
Cpgi17673 | 6 | 1176 | CpG island | CpG island 17673 | ||
Tssr57526 | 6 | 80 | + | TSS region | transcription start site region 57526 | |
Gfpt1 | 6 | 49351 | + | protein coding gene | glutamine fructose-6-phosphate transaminase 1 | |
Tssr57527 | 6 | 11 | + | TSS region | transcription start site region 57527 | |
Tssr57528 | 6 | 11 | + | TSS region | transcription start site region 57528 | |
Tssr57529 | 6 | 11 | + | TSS region | transcription start site region 57529 | |
Tssr57530 | 6 | 32 | + | TSS region | transcription start site region 57530 | |
Tssr57531 | 6 | 8 | + | TSS region | transcription start site region 57531 | |
D6Ertd527e | 6 | 8251 | + | protein coding gene | DNA segment, Chr 6, ERATO Doi 527, expressed | |
Gm40382 | 6 | 5694 | - | lncRNA gene | predicted gene, 40382 | |
Antxr1 | 6 | 201956 | - | protein coding gene | anthrax toxin receptor 1 | |
Tssr61868 | 6 | 12 | - | TSS region | transcription start site region 61868 | |
Gm44415 | 6 | 2111 | - | unclassified gene | predicted gene, 44415 |