Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:86040223-86430719

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49 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Etax6 6 71322621 to 86275719 14953098 QTL ethanol induced ataxia 6
Add2 6 86028681 to 86124409 95728 + protein coding gene adducin 2 (beta)
Gm44090 6 86039934 to 86041767 1833 + unclassified gene predicted gene, 44090
Tssr57447 6 86048357 to 86048360 3 + TSS region transcription start site region 57447
Tssr57448 6 86078037 to 86078063 26 + TSS region transcription start site region 57448
Tssr57449 6 86078070 to 86078089 19 + TSS region transcription start site region 57449
Gm44089 6 86084366 to 86087080 2714 - antisense lncRNA gene predicted gene, 44089
Tssr57450 6 86089685 to 86089688 3 + TSS region transcription start site region 57450
Tssr57451 6 86105188 to 86105192 4 + TSS region transcription start site region 57451
Tssr61787 6 86138433 to 86138434 1 - TSS region transcription start site region 61787
Gm19596 6 86147152 to 86148194 1042 + pseudogene predicted gene, 19596
Cpgi17658 6 86157084 to 86157455 371 CpG island CpG island 17658
Cpgi17659 6 86194741 to 86196296 1555 CpG island CpG island 17659
Tssr57452 6 86195081 to 86195092 11 + TSS region transcription start site region 57452
Tssr57453 6 86195214 to 86195241 27 + TSS region transcription start site region 57453
Tgfa 6 86195223 to 86275719 80496 + protein coding gene transforming growth factor alpha
Tssr57454 6 86195261 to 86195298 37 + TSS region transcription start site region 57454
Tssr57455 6 86195310 to 86195329 19 + TSS region transcription start site region 57455
Tssr57456 6 86195413 to 86195422 9 + TSS region transcription start site region 57456
Tssr57457 6 86195427 to 86195439 12 + TSS region transcription start site region 57457
Tssr57458 6 86195442 to 86195459 17 + TSS region transcription start site region 57458
Gm43917 6 86261555 to 86263914 2359 - unclassified gene predicted gene, 43917
Gm7545 6 86284887 to 86285894 1007 + pseudogene predicted gene 7545
Tssr57459 6 86334009 to 86334011 2 + TSS region transcription start site region 57459
Gm10443 6 86334031 to 86334240 209 + pseudogene predicted pseudogene 10443
Gm18862 6 86351851 to 86352984 1133 + pseudogene predicted gene, 18862
Cpgi17660 6 86365141 to 86366443 1302 CpG island CpG island 17660
Tssr61788 6 86365540 to 86365545 5 - TSS region transcription start site region 61788
Tssr57460 6 86365640 to 86365658 18 + TSS region transcription start site region 57460
Fam136a 6 86365646 to 86370058 4412 + protein coding gene family with sequence similarity 136, member A
Tssr57461 6 86365673 to 86365723 50 + TSS region transcription start site region 57461
Cpgi17661 6 86371290 to 86371934 644 CpG island CpG island 17661
Tssr61789 6 86371378 to 86371412 34 - TSS region transcription start site region 61789
Tssr57462 6 86371489 to 86371550 61 + TSS region transcription start site region 57462
Snrpg 6 86371540 to 86378902 7362 + protein coding gene small nuclear ribonucleoprotein polypeptide G
Gm44941 6 86372538 to 86375285 2747 - antisense lncRNA gene predicted gene 44941
Pcyox1 6 86386006 to 86397154 11148 - protein coding gene prenylcysteine oxidase 1
Tssr61790 6 86388696 to 86388716 20 - TSS region transcription start site region 61790
Cpgi17662 6 86396566 to 86397358 792 CpG island CpG island 17662
Tssr61791 6 86397098 to 86397150 52 - TSS region transcription start site region 61791
Cpgi17663 6 86403874 to 86404817 943 CpG island CpG island 17663
n-TGccc4 6 86403893 to 86403963 70 + tRNA gene nuclear encoded tRNA glycine 4 (anticodon CCC)
Tssr57463 6 86404191 to 86404198 7 + TSS region transcription start site region 57463
Tia1 6 86404219 to 86433405 29186 + protein coding gene cytotoxic granule-associated RNA binding protein 1
Tssr57464 6 86404220 to 86404240 20 + TSS region transcription start site region 57464
Tssr57465 6 86404257 to 86404319 62 + TSS region transcription start site region 57465
Tssr57466 6 86404341 to 86404380 39 + TSS region transcription start site region 57466
Tssr57467 6 86405877 to 86405882 5 + TSS region transcription start site region 57467
Gm44790 6 86426658 to 86445630 18972 + protein coding gene predicted gene 44790