Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:85929352-86079354

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tprkb 6 85911865 to 85930284 18419 + protein coding gene Tp53rk binding protein
Nat8b-ps 6 85932681 to 85933379 698 - pseudogene N-acetyltransferase 8B, pseudogene
Cpgi17654 6 85936668 to 85937359 691 CpG island CpG island 17654
Gm7542 6 85938443 to 85939217 774 + pseudogene predicted gene 7542
Dusp11 6 85942268 to 85961667 19399 - protein coding gene dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)
Tssr61778 6 85945962 to 85945976 14 - TSS region transcription start site region 61778
Tssr61779 6 85957032 to 85957037 5 - TSS region transcription start site region 61779
Cpgi17655 6 85960978 to 85961982 1004 CpG island CpG island 17655
Tssr61780 6 85961597 to 85961598 1 - TSS region transcription start site region 61780
Tssr61781 6 85961603 to 85961627 24 - TSS region transcription start site region 61781
Gm19265 6 85961623 to 86001926 40303 + antisense lncRNA gene predicted gene, 19265
Tssr61782 6 85961631 to 85961671 40 - TSS region transcription start site region 61782
Tssr61783 6 85961672 to 85961683 11 - TSS region transcription start site region 61783
Tssr57433 6 85961715 to 85961760 45 + TSS region transcription start site region 57433
Tssr61784 6 85961961 to 85961974 13 - TSS region transcription start site region 61784
Gm33319 6 85989006 to 86003497 14491 - lncRNA gene predicted gene, 33319
Tssr61785 6 86003576 to 86003588 12 - TSS region transcription start site region 61785
Tssr61786 6 86003595 to 86003625 30 - TSS region transcription start site region 61786
Tssr57434 6 86004352 to 86004354 2 + TSS region transcription start site region 57434
4930553P18Rik 6 86004385 to 86009354 4969 + lincRNA gene RIKEN cDNA 4930553P18 gene
Figla 6 86016494 to 86020996 4502 + protein coding gene folliculogenesis specific basic helix-loop-helix
Cpgi17656 6 86016986 to 86017520 534 CpG island CpG island 17656
Tssr57435 6 86017217 to 86017229 12 + TSS region transcription start site region 57435
Tssr57436 6 86017262 to 86017272 10 + TSS region transcription start site region 57436
Tssr57437 6 86017276 to 86017286 10 + TSS region transcription start site region 57437
Tssr57438 6 86019243 to 86019253 10 + TSS region transcription start site region 57438
Cpgi17657 6 86028569 to 86029449 880 CpG island CpG island 17657
Add2 6 86028681 to 86124409 95728 + protein coding gene adducin 2 (beta)
Tssr57439 6 86028692 to 86028709 17 + TSS region transcription start site region 57439
Tssr57440 6 86028720 to 86028738 18 + TSS region transcription start site region 57440
Tssr57441 6 86028753 to 86028768 15 + TSS region transcription start site region 57441
Tssr57442 6 86028803 to 86028814 11 + TSS region transcription start site region 57442
Tssr57443 6 86028821 to 86028826 5 + TSS region transcription start site region 57443
Tssr57444 6 86028834 to 86028839 5 + TSS region transcription start site region 57444
Tssr57445 6 86028853 to 86028862 9 + TSS region transcription start site region 57445
Tssr57446 6 86028875 to 86028880 5 + TSS region transcription start site region 57446
Gm44090 6 86039934 to 86041767 1833 + unclassified gene predicted gene, 44090
Tssr57447 6 86048357 to 86048360 3 + TSS region transcription start site region 57447
Tssr57448 6 86078037 to 86078063 26 + TSS region transcription start site region 57448
Tssr57449 6 86078070 to 86078089 19 + TSS region transcription start site region 57449