Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:85467531-85822753

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cct7 6 85451514 to 85468475 16961 + protein coding gene chaperonin containing Tcp1, subunit 7 (eta)
Fbxo41 6 85469574 to 85502994 33420 - protein coding gene F-box protein 41
Tssr1915 6 85475656 to 85475659 3 - TSS region transcription start site region 1915
Cpgi17647 6 85483702 to 85485006 1304 CpG island CpG island 17647
Cpgi17648 6 85502541 to 85503271 730 CpG island CpG island 17648
Tssr61756 6 85502928 to 85502965 37 - TSS region transcription start site region 61756
Tssr61757 6 85502980 to 85503034 54 - TSS region transcription start site region 61757
Egr4 6 85511122 to 85513542 2420 - protein coding gene early growth response 4
Cpgi17649 6 85511282 to 85514106 2824 CpG island CpG island 17649
Tssr61758 6 85513291 to 85513292 1 - TSS region transcription start site region 61758
Tssr61759 6 85513586 to 85513591 5 - TSS region transcription start site region 61759
Gm44023 6 85529452 to 85529920 468 + pseudogene predicted gene, 44023
Cpgi17650 6 85587289 to 85588253 964 CpG island CpG island 17650
Tssr57424 6 85587505 to 85587516 11 + TSS region transcription start site region 57424
Tssr57425 6 85587524 to 85587544 20 + TSS region transcription start site region 57425
Alms1 6 85587531 to 85702753 115222 + protein coding gene ALMS1, centrosome and basal body associated
Tssr57426 6 85587562 to 85587573 11 + TSS region transcription start site region 57426
Tssr57427 6 85587591 to 85587630 39 + TSS region transcription start site region 57427
Gm43588 6 85632864 to 85635161 2297 + unclassified gene predicted gene 43588
Gm42600 6 85679277 to 85682864 3587 + unclassified gene predicted gene 42600
Nat8f7 6 85706707 to 85709212 2505 - protein coding gene N-acetyltransferase 8 (GCN5-related) family member 7
Alms1-ps1 6 85721925 to 85756526 34601 + pseudogene ALMS1, centrosome and basal body associated, pseudogene 1
Gm27317 6 85743515 to 85743609 94 - miRNA gene predicted gene, 27317
Nat8f3 6 85760631 to 85765744 5113 - protein coding gene N-acetyltransferase 8 (GCN5-related) family member 3
Mir6375 6 85790140 to 85790234 94 - miRNA gene microRNA 6375
Alms1-ps2 6 85792117 to 85804057 11940 + pseudogene ALMS1, centrosome and basal body associated, pseudogene 2
Nat8f6 6 85808044 to 85809877 1833 - protein coding gene N-acetyltransferase 8 (GCN5-related) family member 6
Nat8f5 6 85817218 to 85820972 3754 - protein coding gene N-acetyltransferase 8 (GCN5-related) family member 5
Tssr61760 6 85820936 to 85820962 26 - TSS region transcription start site region 61760
Tssr61761 6 85820965 to 85820977 12 - TSS region transcription start site region 61761
Tssr61762 6 85820981 to 85820990 9 - TSS region transcription start site region 61762
Tssr61763 6 85821001 to 85821007 6 - TSS region transcription start site region 61763