Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:8544812-9354830

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sig 6 4464884 to 8778488 4313604 heritable phenotypic marker sightless
Gm45062 6 8259450 to 8597480 338030 + protein coding gene predicted gene 45062
Glcci1 6 8509600 to 8597548 87948 + protein coding gene glucocorticoid induced transcript 1
Tssr54921 6 8545325 to 8545329 4 + TSS region transcription start site region 54921
Tssr54922 6 8550370 to 8550375 5 + TSS region transcription start site region 54922
Tssr54923 6 8580634 to 8580635 1 + TSS region transcription start site region 54923
Tssr54924 6 8594279 to 8594288 9 + TSS region transcription start site region 54924
Gm16042 6 8595743 to 8596989 1246 - pseudogene predicted gene 16042
Gm35621 6 8622836 to 8624877 2041 + lncRNA gene predicted gene, 35621
Ica1 6 8630527 to 8778488 147961 - protein coding gene islet cell autoantigen 1
Tssr59812 6 8647781 to 8647792 11 - TSS region transcription start site region 59812
Tssr59813 6 8647798 to 8647806 8 - TSS region transcription start site region 59813
5730409L17Rik 6 8725127 to 8728730 3603 unclassified gene RIKEN cDNA 5730409L17 gene
Cpgi17153 6 8728847 to 8729103 256 CpG island CpG island 17153
Tssr1778 6 8728998 to 8729012 14 - TSS region transcription start site region 1778
Tssr59814 6 8735309 to 8735314 5 - TSS region transcription start site region 59814
Tssr59815 6 8759379 to 8759385 6 - TSS region transcription start site region 59815
Cpgi17154 6 8777458 to 8778624 1166 CpG island CpG island 17154
Tssr59816 6 8778106 to 8778162 56 - TSS region transcription start site region 59816
Tssr59817 6 8778213 to 8778230 17 - TSS region transcription start site region 59817
Tssr59818 6 8778455 to 8778501 46 - TSS region transcription start site region 59818
Tssr59819 6 8778514 to 8778531 17 - TSS region transcription start site region 59819
Tssr59820 6 8778539 to 8778550 11 - TSS region transcription start site region 59820
Gm38765 6 8806263 to 8814118 7855 + lncRNA gene predicted gene, 38765
Gm35674 6 8893106 to 8912473 19367 + lncRNA gene predicted gene, 35674
Cpgi17155 6 8948148 to 8949419 1271 CpG island CpG island 17155
Tssr54925 6 8948427 to 8948438 11 + TSS region transcription start site region 54925
Nxph1 6 8948431 to 9249032 300601 + protein coding gene neurexophilin 1
Tssr54926 6 8948570 to 8948602 32 + TSS region transcription start site region 54926
Tssr54927 6 8948608 to 8948619 11 + TSS region transcription start site region 54927
Tssr54928 6 8948915 to 8948929 14 + TSS region transcription start site region 54928
Tssr54929 6 8948951 to 8948963 12 + TSS region transcription start site region 54929
Tssr54930 6 8949052 to 8949068 16 + TSS region transcription start site region 54930
Cpgi17156 6 8949660 to 8950351 691 CpG island CpG island 17156
Tssr54931 6 8949670 to 8949686 16 + TSS region transcription start site region 54931
Tssr54932 6 8949812 to 8949830 18 + TSS region transcription start site region 54932
Cpgi17157 6 8951054 to 8951766 712 CpG island CpG island 17157
Cpgi17158 6 8955897 to 8956140 243 CpG island CpG island 17158
Cpgi17159 6 8957518 to 8957797 279 CpG island CpG island 17159
Tssr54933 6 9096389 to 9096395 6 + TSS region transcription start site region 54933
Tssr54934 6 9105073 to 9105074 1 + TSS region transcription start site region 54934
Gm35736 6 9146766 to 9147078 312 + pseudogene predicted gene, 35736