MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 6:85284962-85424634

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Sfxn5	6	85213049 to 85333422	120373	-	protein coding gene	sideroflexin 5
Tssr57413	6	85298490 to 85298495	5	+	TSS region	transcription start site region 57413
Cpgi17641	6	85332367 to 85334019	1652		CpG island	CpG island 17641
Tssr57414	6	85332564 to 85332566	2	+	TSS region	transcription start site region 57414
Tssr61744	6	85333412 to 85333441	29	-	TSS region	transcription start site region 61744
Tssr61745	6	85333478 to 85333489	11	-	TSS region	transcription start site region 61745
Rab11fip5	6	85334962 to 85374634	39672	-	protein coding gene	RAB11 family interacting protein 5 (class I)
Mir705	6	85336292 to 85336373	81	-	miRNA gene	microRNA 705
Tssr61746	6	85370098 to 85370109	11	-	TSS region	transcription start site region 61746
Cpgi17642	6	85373879 to 85375206	1327		CpG island	CpG island 17642
Tssr1914	6	85374424 to 85374445	21	-	TSS region	transcription start site region 1914
Tssr61747	6	85374542 to 85374553	11	-	TSS region	transcription start site region 61747
Tssr61748	6	85374574 to 85374579	5	-	TSS region	transcription start site region 61748
Tssr61749	6	85374583 to 85374592	9	-	TSS region	transcription start site region 61749
Tssr61750	6	85374606 to 85374664	58	-	TSS region	transcription start site region 61750
Tssr61751	6	85374679 to 85374704	25	-	TSS region	transcription start site region 61751
Cpgi17643	6	85409104 to 85409442	338		CpG island	CpG island 17643
Noto	6	85423886 to 85428877	4991	+	protein coding gene	notochord homeobox
Cpgi17644	6	85423985 to 85424381	396		CpG island	CpG island 17644