Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:85177319-85377419

30 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi17635	6	85185931 to 85186370	439		CpG island	CpG island 17635
Cpgi17636	6	85186546 to 85187036	490		CpG island	CpG island 17636
Cpgi17637	6	85187151 to 85188834	1683		CpG island	CpG island 17637
Tssr57410	6	85187497 to 85187510	13	+	TSS region	transcription start site region 57410
Tssr57411	6	85187511 to 85187523	12	+	TSS region	transcription start site region 57411
Tssr57412	6	85187526 to 85187569	43	+	TSS region	transcription start site region 57412
Emx1	6	85187931 to 85204463	16532	+	protein coding gene	empty spiracles homeobox 1
Cpgi17638	6	85189940 to 85190900	960		CpG island	CpG island 17638
Cpgi17639	6	85193930 to 85194273	343		CpG island	CpG island 17639
Sfxn5	6	85213049 to 85333422	120373	-	protein coding gene	sideroflexin 5
Tssr61743	6	85213900 to 85213906	6	-	TSS region	transcription start site region 61743
Cpgi17640	6	85223927 to 85224097	170		CpG island	CpG island 17640
D930014O13Rik	6	85243862 to 85246656	2794		unclassified gene	RIKEN cDNA D930014O13 gene
D6Mit391	6	85277319 to 85277419	100		DNA segment	DNA segment, Chr 6, Massachusetts Institute of Technology 391
D6Mit6	6	85277319 to 85277417	98		DNA segment	DNA segment, Chr 6, Massachusetts Institute of Technology 6
Tssr57413	6	85298490 to 85298495	5	+	TSS region	transcription start site region 57413
Cpgi17641	6	85332367 to 85334019	1652		CpG island	CpG island 17641
Tssr57414	6	85332564 to 85332566	2	+	TSS region	transcription start site region 57414
Tssr61744	6	85333412 to 85333441	29	-	TSS region	transcription start site region 61744
Tssr61745	6	85333478 to 85333489	11	-	TSS region	transcription start site region 61745
Rab11fip5	6	85334962 to 85374634	39672	-	protein coding gene	RAB11 family interacting protein 5 (class I)
Mir705	6	85336292 to 85336373	81	-	miRNA gene	microRNA 705
Tssr61746	6	85370098 to 85370109	11	-	TSS region	transcription start site region 61746
Cpgi17642	6	85373879 to 85375206	1327		CpG island	CpG island 17642
Tssr1914	6	85374424 to 85374445	21	-	TSS region	transcription start site region 1914
Tssr61747	6	85374542 to 85374553	11	-	TSS region	transcription start site region 61747
Tssr61748	6	85374574 to 85374579	5	-	TSS region	transcription start site region 61748
Tssr61749	6	85374583 to 85374592	9	-	TSS region	transcription start site region 61749
Tssr61750	6	85374606 to 85374664	58	-	TSS region	transcription start site region 61750
Tssr61751	6	85374679 to 85374704	25	-	TSS region	transcription start site region 61751