Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:83800745-84570774

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57 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nagk 6 83795005 to 83802556 7551 + protein coding gene N-acetylglucosamine kinase
Paip2b 6 83806058 to 83831741 25683 - protein coding gene poly(A) binding protein interacting protein 2B
Cpgi17619 6 83831202 to 83831978 776 CpG island CpG island 17619
Tssr61712 6 83831683 to 83831702 19 - TSS region transcription start site region 61712
Tssr61713 6 83831705 to 83831720 15 - TSS region transcription start site region 61713
Tssr61714 6 83831736 to 83831750 14 - TSS region transcription start site region 61714
Gm23014 6 83836937 to 83837066 129 - snoRNA gene predicted gene, 23014
Tssr57383 6 83841643 to 83841649 6 + TSS region transcription start site region 57383
Gm5312 6 83841682 to 83842228 546 + pseudogene predicted gene 5312
Gm6342 6 83844439 to 83845125 686 - pseudogene predicted gene 6342
Tssr61715 6 83845117 to 83845127 10 - TSS region transcription start site region 61715
Cpgi17620 6 83866948 to 83867682 734 CpG island CpG island 17620
Zfp638 6 83867100 to 83986871 119771 + protein coding gene zinc finger protein 638
Tssr57384 6 83867103 to 83867125 22 + TSS region transcription start site region 57384
Tssr57385 6 83867132 to 83867143 11 + TSS region transcription start site region 57385
Tssr57386 6 83867417 to 83867423 6 + TSS region transcription start site region 57386
Gm44750 6 83870065 to 83872287 2222 + unclassified gene predicted gene 44750
Gm5138 6 83874379 to 83875380 1001 - pseudogene predicted gene 5138
Tssr61716 6 83888610 to 83888617 7 - TSS region transcription start site region 61716
Tssr61717 6 83892846 to 83892870 24 - TSS region transcription start site region 61717
Gm43919 6 83896959 to 83897322 363 + pseudogene predicted gene, 43919
Cpgi17621 6 83914159 to 83915154 995 CpG island CpG island 17621
Tssr57387 6 83914354 to 83914411 57 + TSS region transcription start site region 57387
Tssr57388 6 83953873 to 83953876 3 + TSS region transcription start site region 57388
Gm43920 6 83962277 to 83965048 2771 + sense intronic lncRNA gene predicted gene, 43920
Tssr57389 6 83978288 to 83978293 5 + TSS region transcription start site region 57389
Tssr57390 6 84008337 to 84008357 20 + TSS region transcription start site region 57390
Tssr57391 6 84008362 to 84008404 42 + TSS region transcription start site region 57391
Cpgi17622 6 84008376 to 84009100 724 CpG island CpG island 17622
Tssr57392 6 84008515 to 84008533 18 + TSS region transcription start site region 57392
Tssr57393 6 84008540 to 84008557 17 + TSS region transcription start site region 57393
Dysf 6 84008590 to 84211060 202470 + protein coding gene dysferlin
Tssr57394 6 84008634 to 84008645 11 + TSS region transcription start site region 57394
Tssr57395 6 84008737 to 84008753 16 + TSS region transcription start site region 57395
Tssr57396 6 84008804 to 84008815 11 + TSS region transcription start site region 57396
Gm33024 6 84008898 to 84012121 3223 - antisense lncRNA gene predicted gene, 33024
Tssr57397 6 84008936 to 84008946 10 + TSS region transcription start site region 57397
Tssr61718 6 84010091 to 84010094 3 - TSS region transcription start site region 61718
Cpgi17623 6 84018945 to 84019601 656 CpG island CpG island 17623
Tssr57398 6 84019346 to 84019351 5 + TSS region transcription start site region 57398
Tssr57399 6 84019364 to 84019383 19 + TSS region transcription start site region 57399
Tssr1912 6 84019394 to 84019406 12 + TSS region transcription start site region 1912
Gm7498 6 84031612 to 84032512 900 + pseudogene predicted gene 7498
Tssr57400 6 84088956 to 84088957 1 + TSS region transcription start site region 57400
Gm15475 6 84093772 to 84107007 13235 - antisense lncRNA gene predicted gene 15475
Cpgi17624 6 84105348 to 84106012 664 CpG island CpG island 17624
Tssr61719 6 84106969 to 84107008 39 - TSS region transcription start site region 61719
Tssr57401 6 84154720 to 84154731 11 + TSS region transcription start site region 57401
Tssr57402 6 84154748 to 84154759 11 + TSS region transcription start site region 57402
Tssr57403 6 84185745 to 84185774 29 + TSS region transcription start site region 57403
Gm44127 6 84225252 to 84286603 61351 + lincRNA gene predicted gene, 44127
Gm10445 6 84412942 to 84423838 10896 - lincRNA gene predicted gene 10445
D6Mit322 6 84467068 to 84467190 122 DNA segment DNA Segment, Chr 6, Massachusetts Institute of Technology 322
Gm38845 6 84479845 to 84522036 42191 - lncRNA gene predicted gene, 38845
D6Mit21 6 84518414 to 84518562 148 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 21
4930504D19Rik 6 84535876 to 84536321 445 + lincRNA gene RIKEN cDNA 4930504D19 gene
Tssr57404 6 84551090 to 84551096 6 + TSS region transcription start site region 57404