Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:83692491-83712677

14 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Vax2os	6	83692806 to 83712201	19395	-	antisense lncRNA gene	ventral anterior homeobox 2, opposite strand
Tssr61698	6	83698081 to 83698103	22	-	TSS region	transcription start site region 61698
Cpgi17609	6	83702191 to 83703094	903		CpG island	CpG island 17609
Gm27772	6	83702491 to 83702677	186	+	unclassified non-coding RNA gene	predicted gene, 27772
Tssr61699	6	83703508 to 83703514	6	-	TSS region	transcription start site region 61699
Cpgi17610	6	83703510 to 83703746	236		CpG island	CpG island 17610
Gm27631	6	83703518 to 83703983	465	+	unclassified non-coding RNA gene	predicted gene, 27631
Tssr61700	6	83703528 to 83703533	5	-	TSS region	transcription start site region 61700
Tssr61701	6	83703541 to 83703554	13	-	TSS region	transcription start site region 61701
Cpgi17611	6	83710453 to 83712430	1977		CpG island	CpG island 17611
Gm27893	6	83710739 to 83710932	193	+	unclassified non-coding RNA gene	predicted gene, 27893
Tssr61702	6	83710850 to 83710865	15	-	TSS region	transcription start site region 61702
Tssr57361	6	83711232 to 83711288	56	+	TSS region	transcription start site region 57361
Vax2	6	83711264 to 83738304	27040	+	protein coding gene	ventral anterior homeobox 2