Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:83227355-83327364

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc4a5 6 83219828 to 83304945 85117 + protein coding gene solute carrier family 4, sodium bicarbonate cotransporter, member 5
Tssr57339 6 83237521 to 83237561 40 + TSS region transcription start site region 57339
Tssr57340 6 83237562 to 83237580 18 + TSS region transcription start site region 57340
Tssr57341 6 83237649 to 83237661 12 + TSS region transcription start site region 57341
Tssr57342 6 83239239 to 83239279 40 + TSS region transcription start site region 57342
Tssr1907 6 83248647 to 83248649 2 + TSS region transcription start site region 1907
D6Mit211 6 83248935 to 83249081 146 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 211
D6Mit211.2 6 83249097 to 83249206 109 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 211.2
D6Mit360.1 6 83250477 to 83250612 135 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 360.1
D6Mit360 6 83250612 to 83250733 121 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 360
Cpgi17597 6 83268086 to 83268618 532 CpG island CpG island 17597
Tssr57343 6 83277355 to 83277364 9 + TSS region transcription start site region 57343
Tssr57344 6 83277375 to 83277416 41 + TSS region transcription start site region 57344
Mthfd2 6 83305691 to 83325908 20217 - protein coding gene methylenetetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase
Gm43890 6 83314145 to 83316943 2798 - unclassified gene predicted gene, 43890
Cpgi17598 6 83316986 to 83317743 757 CpG island CpG island 17598
Tssr57345 6 83317252 to 83317264 12 + TSS region transcription start site region 57345
Tssr61637 6 83317538 to 83317588 50 - TSS region transcription start site region 61637
Tssr61638 6 83317589 to 83317602 13 - TSS region transcription start site region 61638
D6UmiJ14 6 83321887 to 83322053 166 DNA segment DNA segment, Chr 6, University of Michigan Jones 14
Cpgi17599 6 83325717 to 83326599 882 CpG island CpG island 17599
Tssr61639 6 83325963 to 83325975 12 - TSS region transcription start site region 61639
Tssr57346 6 83326029 to 83326064 35 + TSS region transcription start site region 57346
Mob1a 6 83326035 to 83342812 16777 + protein coding gene MOB kinase activator 1A
Tssr57347 6 83326071 to 83326085 14 + TSS region transcription start site region 57347
Tssr61640 6 83326251 to 83326298 47 - TSS region transcription start site region 61640