Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:83054599-83096116

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi17581 6 83053510 to 83055416 1906 CpG island CpG island 17581
Aup1 6 83054521 to 83057682 3161 + protein coding gene ancient ubiquitous protein 1
Tssr57280 6 83054722 to 83054739 17 + TSS region transcription start site region 57280
Tssr57281 6 83055207 to 83055233 26 + TSS region transcription start site region 57281
Tssr57282 6 83055493 to 83055525 32 + TSS region transcription start site region 57282
Tssr57283 6 83056560 to 83056578 18 + TSS region transcription start site region 57283
Tssr57284 6 83056768 to 83056784 16 + TSS region transcription start site region 57284
Tssr57285 6 83057010 to 83057032 22 + TSS region transcription start site region 57285
Tssr57286 6 83057053 to 83057068 15 + TSS region transcription start site region 57286
Tssr57287 6 83057266 to 83057300 34 + TSS region transcription start site region 57287
D6Umi2 6 83057469 to 83057926 457 DNA segment DNA segment, Chr 6, University of Michigan 2
Dqx1 6 83057747 to 83067219 9472 + protein coding gene DEAQ RNA-dependent ATPase
Tssr57288 6 83058068 to 83058104 36 + TSS region transcription start site region 57288
D6UmiJ24 6 83061547 to 83061690 143 DNA segment DNA segment, Chr 6, University of Michigan Jones 24
Tlx2 6 83068325 to 83070225 1900 - protein coding gene T cell leukemia, homeobox 2
Cpgi17582 6 83068374 to 83071512 3138 CpG island CpG island 17582
Tssr61617 6 83070361 to 83070377 16 - TSS region transcription start site region 61617
Gm37092 6 83074599 to 83076116 1517 - unclassified gene predicted gene, 37092
Cpgi17583 6 83077613 to 83079105 1492 CpG island CpG island 17583
Tssr61618 6 83078215 to 83078235 20 - TSS region transcription start site region 61618
Tssr57289 6 83078339 to 83078389 50 + TSS region transcription start site region 57289
Pcgf1 6 83078390 to 83080855 2465 + protein coding gene polycomb group ring finger 1
Tssr57290 6 83078606 to 83078669 63 + TSS region transcription start site region 57290
Cpgi17584 6 83086275 to 83087005 730 CpG island CpG island 17584
Lbx2 6 83086365 to 83088241 1876 + protein coding gene ladybird homeobox 2
D6UmiJ4 6 83086615 to 83086743 128 DNA segment DNA segment, Chr 6, University of Michigan Jones 4
Tssr57291 6 83087278 to 83087328 50 + TSS region transcription start site region 57291
Cpgi17585 6 83087355 to 83088070 715 CpG island CpG island 17585
Mir3470a 6 83090311 to 83090387 76 - miRNA gene microRNA 3470a