Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:82851898-83041924

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52 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D6UmiJ20 6 82856673 to 82856811 138 DNA segment DNA segment, Chr 6, University of Michigan Jones 20
Tssr61598 6 82857656 to 82857690 34 - TSS region transcription start site region 61598
D6Mit283 6 82874997 to 82875116 119 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 283
2310069B03Rik 6 82877866 to 82881853 3987 - lincRNA gene RIKEN cDNA 2310069B03 gene
Cpgi17577 6 82881751 to 82881956 205 CpG island CpG island 17577
Tssr61599 6 82883858 to 82883864 6 - TSS region transcription start site region 61599
D6Umi10 6 82884690 to 82884824 134 DNA segment DNA segment, Chr 6, University of Michigan 10
Gm6312 6 82887516 to 82888709 1193 - pseudogene predicted gene 6312
Gm45145 6 82896867 to 82905214 8347 - lincRNA gene predicted gene 45145
Tssr61600 6 82905192 to 82905206 14 - TSS region transcription start site region 61600
Sema4f 6 82911885 to 82939769 27884 - protein coding gene sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain
D6UmiJ23 6 82912428 to 82912559 131 DNA segment DNA segment, Chr 6, University of Michigan Jones 23
Cpgi17578 6 82939108 to 82939857 749 CpG island CpG island 17578
Tssr61601 6 82939559 to 82939587 28 - TSS region transcription start site region 61601
Tssr61602 6 82939634 to 82939652 18 - TSS region transcription start site region 61602
Tssr61603 6 82939676 to 82939760 84 - TSS region transcription start site region 61603
Tssr57261 6 82946898 to 82946924 26 + TSS region transcription start site region 57261
M1ap 6 82946908 to 83030309 83401 + protein coding gene meiosis 1 associated protein
Tssr57262 6 82952737 to 82952743 6 + TSS region transcription start site region 57262
Gm19287 6 82952780 to 82953136 356 + pseudogene predicted gene, 19287
Tssr57263 6 82960209 to 82960218 9 + TSS region transcription start site region 57263
Tssr57264 6 82960241 to 82960252 11 + TSS region transcription start site region 57264
Tssr57265 6 82960269 to 82960278 9 + TSS region transcription start site region 57265
Tssr57266 6 82960540 to 82960547 7 + TSS region transcription start site region 57266
D6UmiJ16 6 82968302 to 82968462 160 DNA segment DNA segment, Chr 6, University of Michigan Jones 16
D6Mit189 6 82985330 to 82985480 150 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 189
Gm43985 6 82990823 to 82991579 756 - pseudogene predicted gene, 43985
Gm43981 6 82991645 to 82993111 1466 + unclassified gene predicted gene, 43981
Tssr57267 6 82998829 to 82998830 1 + TSS region transcription start site region 57267
Tssr61604 6 83004932 to 83004972 40 - TSS region transcription start site region 61604
Tssr57268 6 83005846 to 83005873 27 + TSS region transcription start site region 57268
Tssr57269 6 83006260 to 83006281 21 + TSS region transcription start site region 57269
Gm32644 6 83008181 to 83022898 14717 - lncRNA gene predicted gene, 32644
Tssr57270 6 83008917 to 83008931 14 + TSS region transcription start site region 57270
D6UmiJ18 6 83012200 to 83012353 153 DNA segment DNA segment, Chr 6, University of Michigan Jones 18
Tssr57271 6 83014693 to 83014697 4 + TSS region transcription start site region 57271
Tssr57272 6 83015278 to 83015317 39 + TSS region transcription start site region 57272
Tssr57273 6 83026272 to 83026305 33 + TSS region transcription start site region 57273
D6UmiJ19 6 83028842 to 83028968 126 DNA segment DNA segment, Chr 6, University of Michigan Jones 19
Dok1 6 83030934 to 83033471 2537 - protein coding gene docking protein 1
Cpgi17579 6 83032596 to 83034017 1421 CpG island CpG island 17579
Tssr57274 6 83032805 to 83032820 15 + TSS region transcription start site region 57274
Tssr61605 6 83033200 to 83033211 11 - TSS region transcription start site region 61605
Tssr61606 6 83033336 to 83033347 11 - TSS region transcription start site region 61606
Tssr61607 6 83033367 to 83033378 11 - TSS region transcription start site region 61607
Tssr61608 6 83033398 to 83033409 11 - TSS region transcription start site region 61608
Tssr61609 6 83033412 to 83033419 7 - TSS region transcription start site region 61609
Tssr61610 6 83033422 to 83033476 54 - TSS region transcription start site region 61610
Tssr57275 6 83034188 to 83034252 64 + TSS region transcription start site region 57275
Loxl3 6 83034224 to 83052564 18340 + protein coding gene lysyl oxidase-like 3
Cpgi17580 6 83038622 to 83038970 348 CpG island CpG island 17580
Tssr57276 6 83039276 to 83039283 7 + TSS region transcription start site region 57276