Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:80097244-80937264

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lrrtm4 6 80018877 to 80810143 791266 + protein coding gene leucine rich repeat transmembrane neuronal 4
Gm32091 6 80143742 to 80166659 22917 + lncRNA gene predicted gene, 32091
Tssr57236 6 80149600 to 80149609 9 + TSS region transcription start site region 57236
Tssr57237 6 80173795 to 80173807 12 + TSS region transcription start site region 57237
Tssr57238 6 80174080 to 80174089 9 + TSS region transcription start site region 57238
Tssr57239 6 80174103 to 80174112 9 + TSS region transcription start site region 57239
Tssr1902 6 80185714 to 80185747 33 - TSS region transcription start site region 1902
Tssr57240 6 80192566 to 80192572 6 + TSS region transcription start site region 57240
Tssr57241 6 80214753 to 80214784 31 + TSS region transcription start site region 57241
D6Mit176 6 80217118 to 80217217 99 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 176
Gm44228 6 80217451 to 80219476 2025 + unclassified gene predicted gene, 44228
Gm44230 6 80268496 to 80272045 3549 + unclassified gene predicted gene, 44230
Gm20371 6 80302613 to 80304368 1755 + unclassified gene predicted gene, 20371
Tssr57242 6 80314451 to 80314460 9 + TSS region transcription start site region 57242
Gm44241 6 80319192 to 80320853 1661 + unclassified gene predicted gene, 44241
D6Abb1e 6 80371275 to 80371531 256 DNA segment DNA segment, Chr 6, Abbott 1 expressed
Tssr57243 6 80401605 to 80401612 7 + TSS region transcription start site region 57243
Gm44229 6 80445350 to 80447836 2486 + unclassified gene predicted gene, 44229
Tssr57244 6 80458746 to 80458747 1 + TSS region transcription start site region 57244
Im4 6 80484738 to 80484905 167 QTL immunoregulatory 4
D6Mit5 6 80484738 to 80484905 167 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 5
D6Mit282 6 80493876 to 80493990 114 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 282
C030013C02Rik 6 80504873 to 80505344 471 unclassified gene RIKEN cDNA C030013C02 gene
Gm44242 6 80514594 to 80517314 2720 + unclassified gene predicted gene, 44242
Tssr57245 6 80517244 to 80517264 20 + TSS region transcription start site region 57245
Tssr57246 6 80566150 to 80566154 4 + TSS region transcription start site region 57246
D6Mit4 6 80638709 to 80638806 97 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 4
Gm44231 6 80655029 to 80659103 4074 + unclassified gene predicted gene, 44231
D6Mit212 6 80700081 to 80700213 132 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 212
Tssr57247 6 80809572 to 80809606 34 + TSS region transcription start site region 57247
Gm43900 6 80827138 to 80829806 2668 + unclassified gene predicted gene, 43900