Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:77138421-78378445

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80 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mrdq5 6 32850650 to 78238974 45388324 QTL modifier of retinal degeneration QTL 5
Ogrq3 6 43826813 to 77811523 33984710 QTL overall growth rate QTL 3
Pwbwq10 6 43826813 to 77811523 33984710 QTL post-weaning body weight QTL 10
Pwgrq5 6 43826813 to 77811523 33984710 QTL pre-weaning growth rate QTL 5
Pwgrq16 6 43826813 to 77811523 33984710 QTL post-weaning growth rate QTL 16
Pwbwq12 6 43826813 to 77811523 33984710 QTL post-weaning body weight QTL 12
Pwbwq11 6 43826813 to 77811523 33984710 QTL post-weaning body weight QTL 11
Ctnna2 6 76881637 to 77979699 1098062 - protein coding gene catenin (cadherin associated protein), alpha 2
Tssr61524 6 77227680 to 77227686 6 - TSS region transcription start site region 61524
Cpgi17562 6 77242572 to 77243234 662 CpG island CpG island 17562
Tssr57178 6 77242629 to 77242640 11 + TSS region transcription start site region 57178
Tssr57179 6 77242644 to 77242697 53 + TSS region transcription start site region 57179
Lrrtm1 6 77242689 to 77257791 15102 + protein coding gene leucine rich repeat transmembrane neuronal 1
Tssr57180 6 77242715 to 77242729 14 + TSS region transcription start site region 57180
Tssr57181 6 77243269 to 77243285 16 + TSS region transcription start site region 57181
Cpgi17563 6 77243605 to 77245139 1534 CpG island CpG island 17563
Tssr57182 6 77244021 to 77244032 11 + TSS region transcription start site region 57182
Tssr57183 6 77245245 to 77245249 4 + TSS region transcription start site region 57183
Tssr61525 6 77292235 to 77292236 1 - TSS region transcription start site region 61525
Gm44234 6 77323906 to 77324805 899 - unclassified gene predicted gene, 44234
Tssr61526 6 77349497 to 77349535 38 - TSS region transcription start site region 61526
Tssr61527 6 77349622 to 77349647 25 - TSS region transcription start site region 61527
Tssr61528 6 77377464 to 77377468 4 - TSS region transcription start site region 61528
6330415B21Rik 6 77380260 to 77382459 2199 - lncRNA gene RIKEN cDNA 6330415B21 gene
Tssr61529 6 77394427 to 77394433 6 - TSS region transcription start site region 61529
Gm44435 6 77412300 to 77416418 4118 - unclassified gene predicted gene, 44435
Gm44433 6 77428678 to 77433509 4831 - unclassified gene predicted gene, 44433
Gm44235 6 77471138 to 77474195 3057 - unclassified gene predicted gene, 44235
Tssr61530 6 77472150 to 77472155 5 - TSS region transcription start site region 61530
Tssr61531 6 77476595 to 77476608 13 - TSS region transcription start site region 61531
Tssr61532 6 77476711 to 77476742 31 - TSS region transcription start site region 61532
Tssr61533 6 77478010 to 77478016 6 - TSS region transcription start site region 61533
Tssr61534 6 77511841 to 77511845 4 - TSS region transcription start site region 61534
Tssr61535 6 77526971 to 77526977 6 - TSS region transcription start site region 61535
Gm44438 6 77539847 to 77543082 3235 - unclassified gene predicted gene, 44438
Tssr61536 6 77545184 to 77545213 29 - TSS region transcription start site region 61536
D6Mit19 6 77554468 to 77554666 198 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 19
Gm44286 6 77586995 to 77588481 1486 - unclassified gene predicted gene, 44286
Gm38837 6 77598739 to 77605174 6435 - lncRNA gene predicted gene, 38837
Gm44288 6 77692979 to 77695773 2794 - unclassified gene predicted gene, 44288
Gm44437 6 77745745 to 77749782 4037 - unclassified gene predicted gene, 44437
D6Mit246 6 77746557 to 77746664 107 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 246
Tssr61537 6 77758421 to 77758445 24 - TSS region transcription start site region 61537
Cpgi17564 6 77979301 to 77980123 822 CpG island CpG island 17564
Tssr61538 6 77979482 to 77979500 18 - TSS region transcription start site region 61538
Tssr61539 6 77979515 to 77979622 107 - TSS region transcription start site region 61539
Tssr61540 6 77979652 to 77979708 56 - TSS region transcription start site region 61540
Tssr61541 6 77979730 to 77979735 5 - TSS region transcription start site region 61541
Gm44255 6 77984516 to 77986568 2052 + unclassified gene predicted gene, 44255
Alh1 6 78000000 to 97000000 19000000 QTL amplitude of lateral head displacement 1
Gm21045 6 78068574 to 78069593 1019 - pseudogene predicted gene, 21045
Gm5576 6 78215878 to 78217113 1235 + pseudogene predicted pseudogene 5576
Tssr57184 6 78370618 to 78370629 11 + TSS region transcription start site region 57184
Tssr57185 6 78370652 to 78370670 18 + TSS region transcription start site region 57185
Tssr57186 6 78370877 to 78370892 15 + TSS region transcription start site region 57186
Reg3b 6 78370885 to 78373466 2581 + protein coding gene regenerating islet-derived 3 beta
Tssr57187 6 78371042 to 78371050 8 + TSS region transcription start site region 57187
Tssr57188 6 78371170 to 78371183 13 + TSS region transcription start site region 57188
Tssr57189 6 78371189 to 78371206 17 + TSS region transcription start site region 57189
Tssr57190 6 78371222 to 78371227 5 + TSS region transcription start site region 57190
Tssr57191 6 78371790 to 78371826 36 + TSS region transcription start site region 57191
Tssr57192 6 78371830 to 78371837 7 + TSS region transcription start site region 57192
Tssr57193 6 78371848 to 78371866 18 + TSS region transcription start site region 57193
Tssr61542 6 78371857 to 78371877 20 - TSS region transcription start site region 61542
Tssr1894 6 78371894 to 78371912 18 - TSS region transcription start site region 1894
Tssr57194 6 78372097 to 78372138 41 + TSS region transcription start site region 57194
Tssr57195 6 78372140 to 78372184 44 + TSS region transcription start site region 57195
Tssr61543 6 78372209 to 78372218 9 - TSS region transcription start site region 61543
Tssr57196 6 78372823 to 78372864 41 + TSS region transcription start site region 57196
Tssr1895 6 78372864 to 78372872 8 - TSS region transcription start site region 1895
Tssr57197 6 78372867 to 78372895 28 + TSS region transcription start site region 57197
Tssr61544 6 78372890 to 78372905 15 - TSS region transcription start site region 61544
Tssr57198 6 78373226 to 78373236 10 + TSS region transcription start site region 57198
Tssr61545 6 78373231 to 78373242 11 - TSS region transcription start site region 61545
Tssr57199 6 78373353 to 78373364 11 + TSS region transcription start site region 57199
Tssr57200 6 78373394 to 78373404 10 + TSS region transcription start site region 57200
Tssr57201 6 78373415 to 78373422 7 + TSS region transcription start site region 57201
Tssr1896 6 78373430 to 78373437 7 + TSS region transcription start site region 1896
Tssr61546 6 78373461 to 78373464 3 - TSS region transcription start site region 61546
Reg3d 6 78375874 to 78378865 2991 - protein coding gene regenerating islet-derived 3 delta