Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:76427680-78027686

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63 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ogrq3 6 43826813 to 77811523 33984710 QTL overall growth rate QTL 3
Pwbwq12 6 43826813 to 77811523 33984710 QTL post-weaning body weight QTL 12
Pwgrq5 6 43826813 to 77811523 33984710 QTL pre-weaning growth rate QTL 5
Pwgrq16 6 43826813 to 77811523 33984710 QTL post-weaning growth rate QTL 16
Pwbwq10 6 43826813 to 77811523 33984710 QTL post-weaning body weight QTL 10
Pwbwq11 6 43826813 to 77811523 33984710 QTL post-weaning body weight QTL 11
Gm44163 6 76455391 to 76455865 474 - pseudogene predicted gene, 44163
D6Mit225 6 76488949 to 76489087 138 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 225
Gm9008 6 76495445 to 76497733 2288 - protein coding gene predicted pseudogene 9008
Gm44166 6 76496082 to 76497524 1442 + antisense lncRNA gene predicted gene, 44166
Tssr61522 6 76498095 to 76498113 18 - TSS region transcription start site region 61522
Tssr57177 6 76632655 to 76632656 1 + TSS region transcription start site region 57177
Gm38836 6 76695452 to 76711577 16125 - lncRNA gene predicted gene, 38836
D6Mit208 6 76703577 to 76703724 147 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 208
D6Mit359 6 76707270 to 76707541 271 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 359
Gm31860 6 76810336 to 76815549 5213 - lncRNA gene predicted gene, 31860
Ctnna2 6 76881637 to 77979699 1098062 - protein coding gene catenin (cadherin associated protein), alpha 2
Tssr61523 6 76902323 to 76902361 38 - TSS region transcription start site region 61523
5830431M20Rik 6 76987978 to 76989646 1668 unclassified gene RIKEN cDNA 5830431M20 gene
Bwq2 6 77057680 to 77057799 119 QTL body weight QTL 2
D6Mit361 6 77057680 to 77057799 119 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 361
Tssr61524 6 77227680 to 77227686 6 - TSS region transcription start site region 61524
Cpgi17562 6 77242572 to 77243234 662 CpG island CpG island 17562
Tssr57178 6 77242629 to 77242640 11 + TSS region transcription start site region 57178
Tssr57179 6 77242644 to 77242697 53 + TSS region transcription start site region 57179
Lrrtm1 6 77242689 to 77257791 15102 + protein coding gene leucine rich repeat transmembrane neuronal 1
Tssr57180 6 77242715 to 77242729 14 + TSS region transcription start site region 57180
Tssr57181 6 77243269 to 77243285 16 + TSS region transcription start site region 57181
Cpgi17563 6 77243605 to 77245139 1534 CpG island CpG island 17563
Tssr57182 6 77244021 to 77244032 11 + TSS region transcription start site region 57182
Tssr57183 6 77245245 to 77245249 4 + TSS region transcription start site region 57183
Tssr61525 6 77292235 to 77292236 1 - TSS region transcription start site region 61525
Gm44234 6 77323906 to 77324805 899 - unclassified gene predicted gene, 44234
Tssr61526 6 77349497 to 77349535 38 - TSS region transcription start site region 61526
Tssr61527 6 77349622 to 77349647 25 - TSS region transcription start site region 61527
Tssr61528 6 77377464 to 77377468 4 - TSS region transcription start site region 61528
6330415B21Rik 6 77380260 to 77382459 2199 - lncRNA gene RIKEN cDNA 6330415B21 gene
Tssr61529 6 77394427 to 77394433 6 - TSS region transcription start site region 61529
Gm44435 6 77412300 to 77416418 4118 - unclassified gene predicted gene, 44435
Gm44433 6 77428678 to 77433509 4831 - unclassified gene predicted gene, 44433
Gm44235 6 77471138 to 77474195 3057 - unclassified gene predicted gene, 44235
Tssr61530 6 77472150 to 77472155 5 - TSS region transcription start site region 61530
Tssr61531 6 77476595 to 77476608 13 - TSS region transcription start site region 61531
Tssr61532 6 77476711 to 77476742 31 - TSS region transcription start site region 61532
Tssr61533 6 77478010 to 77478016 6 - TSS region transcription start site region 61533
Tssr61534 6 77511841 to 77511845 4 - TSS region transcription start site region 61534
Tssr61535 6 77526971 to 77526977 6 - TSS region transcription start site region 61535
Gm44438 6 77539847 to 77543082 3235 - unclassified gene predicted gene, 44438
Tssr61536 6 77545184 to 77545213 29 - TSS region transcription start site region 61536
D6Mit19 6 77554468 to 77554666 198 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 19
Gm44286 6 77586995 to 77588481 1486 - unclassified gene predicted gene, 44286
Gm38837 6 77598739 to 77605174 6435 - lncRNA gene predicted gene, 38837
Gm44288 6 77692979 to 77695773 2794 - unclassified gene predicted gene, 44288
Gm44437 6 77745745 to 77749782 4037 - unclassified gene predicted gene, 44437
D6Mit246 6 77746557 to 77746664 107 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 246
Tssr61537 6 77758421 to 77758445 24 - TSS region transcription start site region 61537
Cpgi17564 6 77979301 to 77980123 822 CpG island CpG island 17564
Tssr61538 6 77979482 to 77979500 18 - TSS region transcription start site region 61538
Tssr61539 6 77979515 to 77979622 107 - TSS region transcription start site region 61539
Tssr61540 6 77979652 to 77979708 56 - TSS region transcription start site region 61540
Tssr61541 6 77979730 to 77979735 5 - TSS region transcription start site region 61541
Gm44255 6 77984516 to 77986568 2052 + unclassified gene predicted gene, 44255
Alh1 6 78000000 to 97000000 19000000 QTL amplitude of lateral head displacement 1