Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:72430631-72610643

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ggcx 6 72414308 to 72430712 16404 + protein coding gene gamma-glutamyl carboxylase
Mat2a 6 72432799 to 72439558 6759 - protein coding gene methionine adenosyltransferase II, alpha
Tssr61457 6 72437072 to 72437086 14 - TSS region transcription start site region 61457
Cpgi17545 6 72438753 to 72440335 1582 CpG island CpG island 17545
Tssr57134 6 72439034 to 72439065 31 + TSS region transcription start site region 57134
Particl 6 72439051 to 72440610 1559 + lncRNA gene promoter of Mat2a antisense radiation induced circulating long non-coding RNA
Tssr61458 6 72439549 to 72439564 15 - TSS region transcription start site region 61458
Cpgi17546 6 72512461 to 72513032 571 CpG island CpG island 17546
Sh2d6 6 72513641 to 72521707 8066 - protein coding gene SH2 domain containing 6
Tssr61459 6 72520003 to 72520037 34 - TSS region transcription start site region 61459
Tssr61460 6 72520631 to 72520643 12 - TSS region transcription start site region 61460
Tssr61461 6 72521671 to 72521674 3 - TSS region transcription start site region 61461
Tssr61462 6 72521693 to 72521707 14 - TSS region transcription start site region 61462
Tssr61463 6 72521710 to 72521739 29 - TSS region transcription start site region 61463
Tssr61464 6 72522458 to 72522480 22 - TSS region transcription start site region 61464
Tssr61465 6 72522577 to 72522585 8 - TSS region transcription start site region 61465
Tssr1890 6 72538224 to 72538260 36 + TSS region transcription start site region 1890
Tssr1891 6 72544324 to 72544349 25 - TSS region transcription start site region 1891
Capg 6 72544391 to 72562983 18592 + protein coding gene capping protein (actin filament), gelsolin-like
Tssr57135 6 72544411 to 72544449 38 + TSS region transcription start site region 57135
Tssr57136 6 72549163 to 72549191 28 + TSS region transcription start site region 57136
Tssr57137 6 72549252 to 72549264 12 + TSS region transcription start site region 57137
Tssr57138 6 72549414 to 72549428 14 + TSS region transcription start site region 57138
Tssr57139 6 72549430 to 72549478 48 + TSS region transcription start site region 57139
Tssr57140 6 72549732 to 72549763 31 + TSS region transcription start site region 57140
Tssr57141 6 72550183 to 72550209 26 + TSS region transcription start site region 57141
Tssr61466 6 72550844 to 72550863 19 - TSS region transcription start site region 61466
Tssr61467 6 72552219 to 72552231 12 - TSS region transcription start site region 61467
Tssr61468 6 72552724 to 72552781 57 - TSS region transcription start site region 61468
Cpgi17547 6 72552850 to 72553092 242 CpG island CpG island 17547
Tssr57142 6 72555773 to 72555803 30 + TSS region transcription start site region 57142
Tssr57143 6 72555815 to 72555829 14 + TSS region transcription start site region 57143
Tssr57144 6 72556080 to 72556118 38 + TSS region transcription start site region 57144
Tssr57145 6 72556146 to 72556158 12 + TSS region transcription start site region 57145
Tssr57146 6 72556161 to 72556177 16 + TSS region transcription start site region 57146
Tssr57147 6 72557334 to 72557343 9 + TSS region transcription start site region 57147
Tssr61469 6 72557789 to 72557815 26 - TSS region transcription start site region 61469
Tssr57148 6 72558673 to 72558687 14 + TSS region transcription start site region 57148
Tssr57149 6 72558766 to 72558856 90 + TSS region transcription start site region 57149
Elmod3 6 72565922 to 72598413 32491 - protein coding gene ELMO/CED-12 domain containing 3
Cpgi17548 6 72598124 to 72598970 846 CpG island CpG island 17548
Tssr61470 6 72598330 to 72598368 38 - TSS region transcription start site region 61470
Tssr61471 6 72598381 to 72598424 43 - TSS region transcription start site region 61471
Tssr57150 6 72598594 to 72598609 15 + TSS region transcription start site region 57150
Retsat 6 72598628 to 72607488 8860 + protein coding gene retinol saturase (all trans retinol 13,14 reductase)
Gm45053 6 72603004 to 72605502 2498 - unclassified gene predicted gene 45053
Tssr57151 6 72606391 to 72606394 3 + TSS region transcription start site region 57151
Tgoln1 6 72608432 to 72617000 8568 - protein coding gene trans-golgi network protein
Gm20536 6 72609836 to 72616190 6354 + unclassified non-coding RNA gene predicted gene 20536
Tssr61472 6 72610251 to 72610255 4 - TSS region transcription start site region 61472
Tssr61473 6 72610436 to 72610449 13 - TSS region transcription start site region 61473
Tssr61474 6 72610510 to 72610532 22 - TSS region transcription start site region 61474
Tssr61475 6 72610592 to 72610600 8 - TSS region transcription start site region 61475