Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:72382799-72489558

23 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Vamp8	6	72385221 to 72390667	5446	-	protein coding gene	vesicle-associated membrane protein 8
Tssr57128	6	72385224 to 72385236	12	+	TSS region	transcription start site region 57128
Tssr57129	6	72390004 to 72390014	10	+	TSS region	transcription start site region 57129
Cpgi17543	6	72390034 to 72390523	489		CpG island	CpG island 17543
Tssr61451	6	72390485 to 72390583	98	-	TSS region	transcription start site region 61451
Tssr61452	6	72390621 to 72390639	18	-	TSS region	transcription start site region 61452
Tssr61453	6	72390659 to 72390670	11	-	TSS region	transcription start site region 61453
Tssr61454	6	72394538 to 72394545	7	-	TSS region	transcription start site region 61454
Tssr61455	6	72394550 to 72394575	25	-	TSS region	transcription start site region 61455
Tssr61456	6	72394586 to 72394603	17	-	TSS region	transcription start site region 61456
Tssr57130	6	72395778 to 72395784	6	+	TSS region	transcription start site region 57130
Cpgi17544	6	72414116 to 72414553	437		CpG island	CpG island 17544
Tssr57131	6	72414301 to 72414319	18	+	TSS region	transcription start site region 57131
Ggcx	6	72414308 to 72430712	16404	+	protein coding gene	gamma-glutamyl carboxylase
Tssr57132	6	72414323 to 72414352	29	+	TSS region	transcription start site region 57132
Tssr57133	6	72414353 to 72414388	35	+	TSS region	transcription start site region 57133
Tssr1889	6	72430430 to 72430447	17	+	TSS region	transcription start site region 1889
Mat2a	6	72432799 to 72439558	6759	-	protein coding gene	methionine adenosyltransferase II, alpha
Tssr61457	6	72437072 to 72437086	14	-	TSS region	transcription start site region 61457
Cpgi17545	6	72438753 to 72440335	1582		CpG island	CpG island 17545
Tssr57134	6	72439034 to 72439065	31	+	TSS region	transcription start site region 57134
Particl	6	72439051 to 72440610	1559	+	lncRNA gene	promoter of Mat2a antisense radiation induced circulating long non-coding RNA
Tssr61458	6	72439549 to 72439564	15	-	TSS region	transcription start site region 61458