Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:72307301-72387379

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86 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sftpb 6 72304610 to 72314371 9761 + protein coding gene surfactant associated protein B
Tssr57093 6 72309755 to 72309771 16 + TSS region transcription start site region 57093
Tssr57094 6 72309803 to 72309820 17 + TSS region transcription start site region 57094
Tssr57095 6 72309829 to 72309849 20 + TSS region transcription start site region 57095
Tssr57096 6 72309866 to 72309881 15 + TSS region transcription start site region 57096
Tssr57097 6 72310484 to 72310488 4 + TSS region transcription start site region 57097
Tssr57098 6 72310624 to 72310646 22 + TSS region transcription start site region 57098
Tssr57099 6 72310708 to 72310747 39 + TSS region transcription start site region 57099
Tssr61420 6 72310767 to 72310780 13 - TSS region transcription start site region 61420
Tssr57100 6 72312866 to 72312918 52 + TSS region transcription start site region 57100
Tssr57101 6 72313608 to 72313611 3 + TSS region transcription start site region 57101
Tssr57102 6 72313699 to 72313710 11 + TSS region transcription start site region 57102
Tssr57103 6 72313790 to 72313796 6 + TSS region transcription start site region 57103
Tssr57104 6 72313983 to 72313999 16 + TSS region transcription start site region 57104
Tssr61421 6 72314041 to 72314077 36 - TSS region transcription start site region 61421
Tssr57105 6 72314181 to 72314201 20 + TSS region transcription start site region 57105
Tssr57106 6 72314282 to 72314312 30 + TSS region transcription start site region 57106
Tssr57107 6 72314382 to 72314419 37 + TSS region transcription start site region 57107
Tssr57108 6 72314424 to 72314447 23 + TSS region transcription start site region 57108
Tssr57109 6 72314475 to 72314496 21 + TSS region transcription start site region 57109
Tssr57110 6 72314511 to 72314520 9 + TSS region transcription start site region 57110
Tssr57111 6 72314527 to 72314539 12 + TSS region transcription start site region 57111
Tssr1886 6 72314554 to 72314558 4 + TSS region transcription start site region 1886
Tssr57112 6 72314597 to 72314608 11 + TSS region transcription start site region 57112
Tssr61422 6 72314615 to 72314659 44 - TSS region transcription start site region 61422
Tssr61423 6 72314663 to 72314699 36 - TSS region transcription start site region 61423
Tssr61424 6 72314704 to 72314721 17 - TSS region transcription start site region 61424
Tssr57113 6 72314733 to 72314749 16 + TSS region transcription start site region 57113
Tssr61425 6 72314768 to 72314775 7 - TSS region transcription start site region 61425
Tssr61426 6 72314780 to 72314789 9 - TSS region transcription start site region 61426
Tssr57114 6 72314875 to 72314892 17 + TSS region transcription start site region 57114
D6Mit243 6 72314895 to 72315010 115 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 243
Tssr57115 6 72314896 to 72314917 21 + TSS region transcription start site region 57115
Tssr61427 6 72315006 to 72315021 15 - TSS region transcription start site region 61427
Tssr57116 6 72315982 to 72315998 16 + TSS region transcription start site region 57116
Usp39 6 72318678 to 72345184 26506 - protein coding gene ubiquitin specific peptidase 39
Tssr61428 6 72333243 to 72333256 13 - TSS region transcription start site region 61428
Tssr61429 6 72333274 to 72333287 13 - TSS region transcription start site region 61429
Tssr61430 6 72333354 to 72333368 14 - TSS region transcription start site region 61430
Tssr61431 6 72333372 to 72333383 11 - TSS region transcription start site region 61431
Tssr61432 6 72333466 to 72333471 5 - TSS region transcription start site region 61432
Tssr61433 6 72338512 to 72338528 16 - TSS region transcription start site region 61433
Cpgi17538 6 72344547 to 72345462 915 CpG island CpG island 17538
Tssr61434 6 72345121 to 72345132 11 - TSS region transcription start site region 61434
Tssr61435 6 72345134 to 72345143 9 - TSS region transcription start site region 61435
Tssr61436 6 72345144 to 72345206 62 - TSS region transcription start site region 61436
Gm45051 6 72347029 to 72348458 1429 - antisense lncRNA gene predicted gene 45051
Cpgi17539 6 72347160 to 72347922 762 CpG island CpG island 17539
Tssr57117 6 72347301 to 72347379 78 + TSS region transcription start site region 57117
0610030E20Rik 6 72347317 to 72353148 5831 + protein coding gene RIKEN cDNA 0610030E20 gene
Tssr57118 6 72347382 to 72347390 8 + TSS region transcription start site region 57118
Tssr61437 6 72347680 to 72347753 73 - TSS region transcription start site region 61437
Tssr57119 6 72347710 to 72347714 4 + TSS region transcription start site region 57119
Tssr61438 6 72347818 to 72347829 11 - TSS region transcription start site region 61438
Tssr57120 6 72351841 to 72351885 44 + TSS region transcription start site region 57120
Cpgi17540 6 72354950 to 72356037 1087 CpG island CpG island 17540
Tssr57121 6 72355425 to 72355487 62 + TSS region transcription start site region 57121
Tmem150a 6 72355483 to 72359762 4279 + protein coding gene transmembrane protein 150A
Tssr57122 6 72355745 to 72355765 20 + TSS region transcription start site region 57122
Tssr1887 6 72355773 to 72355785 12 + TSS region transcription start site region 1887
Tssr57123 6 72356104 to 72356127 23 + TSS region transcription start site region 57123
Tssr1888 6 72356172 to 72356200 28 + TSS region transcription start site region 1888
Tssr57124 6 72356209 to 72356221 12 + TSS region transcription start site region 57124
Tssr57125 6 72356232 to 72356256 24 + TSS region transcription start site region 57125
Tssr57126 6 72357953 to 72357966 13 + TSS region transcription start site region 57126
Rnf181 6 72359714 to 72366956 7242 - protein coding gene ring finger protein 181
Tssr61439 6 72361036 to 72361039 3 - TSS region transcription start site region 61439
Tssr61440 6 72361425 to 72361439 14 - TSS region transcription start site region 61440
Cpgi17541 6 72362024 to 72362555 531 CpG island CpG island 17541
Tssr61441 6 72362365 to 72362379 14 - TSS region transcription start site region 61441
Tssr61442 6 72362383 to 72362417 34 - TSS region transcription start site region 61442
Tssr61443 6 72366952 to 72366963 11 - TSS region transcription start site region 61443
Tssr61444 6 72366967 to 72366975 8 - TSS region transcription start site region 61444
Tssr61445 6 72366985 to 72366991 6 - TSS region transcription start site region 61445
Tssr57127 6 72367086 to 72367094 8 + TSS region transcription start site region 57127
Vamp5 6 72368794 to 72380468 11674 - protein coding gene vesicle-associated membrane protein 5
Tssr61446 6 72371247 to 72371294 47 - TSS region transcription start site region 61446
BC019510 6 72372800 to 72374704 1904 unclassified gene cDNA sequence BC019510
Tssr61447 6 72374680 to 72374683 3 - TSS region transcription start site region 61447
A930026B05Rik 6 72375929 to 72376984 1055 unclassified gene RIKEN cDNA A930026B05 gene
Cpgi17542 6 72380044 to 72380742 698 CpG island CpG island 17542
Tssr61448 6 72380416 to 72380483 67 - TSS region transcription start site region 61448
Tssr61449 6 72381680 to 72381705 25 - TSS region transcription start site region 61449
Tssr61450 6 72381754 to 72381759 5 - TSS region transcription start site region 61450
Vamp8 6 72385221 to 72390667 5446 - protein coding gene vesicle-associated membrane protein 8
Tssr57128 6 72385224 to 72385236 12 + TSS region transcription start site region 57128