Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:72119133-72259344

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
St3gal5 6 72097592 to 72154571 56979 + protein coding gene ST3 beta-galactoside alpha-2,3-sialyltransferase 5
4933431G14Rik 6 72120213 to 72123197 2984 - antisense lncRNA gene RIKEN cDNA 4933431G14 gene
Tssr61409 6 72123187 to 72123220 33 - TSS region transcription start site region 61409
Tssr57068 6 72125428 to 72125447 19 + TSS region transcription start site region 57068
Tssr61410 6 72128346 to 72128362 16 - TSS region transcription start site region 61410
Tssr57069 6 72132050 to 72132077 27 + TSS region transcription start site region 57069
Tssr61411 6 72140483 to 72140509 26 - TSS region transcription start site region 61411
Tssr57070 6 72140949 to 72140977 28 + TSS region transcription start site region 57070
Tssr57071 6 72142134 to 72142141 7 + TSS region transcription start site region 57071
Tssr57072 6 72142172 to 72142191 19 + TSS region transcription start site region 57072
Tssr57073 6 72153671 to 72153691 20 + TSS region transcription start site region 57073
Tssr57074 6 72153732 to 72153747 15 + TSS region transcription start site region 57074
Tssr57075 6 72162806 to 72162837 31 + TSS region transcription start site region 57075
Gm38832 6 72162849 to 72167707 4858 + lincRNA gene predicted gene, 38832
Cpgi17534 6 72165020 to 72165262 242 CpG island CpG island 17534
Tssr57076 6 72181297 to 72181298 1 + TSS region transcription start site region 57076
Cpgi17535 6 72189133 to 72189344 211 CpG island CpG island 17535
Atoh8 6 72206177 to 72235577 29400 - protein coding gene atonal bHLH transcription factor 8
Cpgi17536 6 72216599 to 72217180 581 CpG island CpG island 17536
Cpgi17537 6 72234017 to 72236035 2018 CpG island CpG island 17537
Tssr61412 6 72234456 to 72234470 14 - TSS region transcription start site region 61412
Tssr61413 6 72234471 to 72234543 72 - TSS region transcription start site region 61413
Tssr61414 6 72235185 to 72235202 17 - TSS region transcription start site region 61414
Tssr61415 6 72235216 to 72235234 18 - TSS region transcription start site region 61415
Tssr61416 6 72235238 to 72235278 40 - TSS region transcription start site region 61416
Tssr61417 6 72235402 to 72235419 17 - TSS region transcription start site region 61417
Tssr61418 6 72235463 to 72235496 33 - TSS region transcription start site region 61418
Tssr61419 6 72235559 to 72235618 59 - TSS region transcription start site region 61419
Gm30782 6 72250097 to 72254990 4893 - lncRNA gene predicted gene, 30782