Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:71910163-72110166

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Polr1a 6 71909053 to 71979435 70382 + protein coding gene polymerase (RNA) I polypeptide A
Tssr57049 6 71912234 to 71912252 18 + TSS region transcription start site region 57049
Gm19078 6 71918901 to 71919844 943 - pseudogene predicted gene, 19078
Tssr57050 6 71926079 to 71926110 31 + TSS region transcription start site region 57050
Tssr57051 6 71936008 to 71936040 32 + TSS region transcription start site region 57051
Gm26628 6 71961145 to 71963775 2630 - antisense lncRNA gene predicted gene, 26628
Tssr61404 6 72010163 to 72010166 3 - TSS region transcription start site region 61404
9130221F21Rik 6 72013896 to 72042528 28632 - lincRNA gene RIKEN cDNA 9130221F21 gene
Tssr61405 6 72042517 to 72042533 16 - TSS region transcription start site region 61405
Tssr61406 6 72042537 to 72042540 3 - TSS region transcription start site region 61406
Tssr61407 6 72042544 to 72042560 16 - TSS region transcription start site region 61407
Tssr61408 6 72042569 to 72042572 3 - TSS region transcription start site region 61408
D6Mit319 6 72059944 to 72060063 119 DNA segment DNA Segment, Chr 6, Massachusetts Institute of Technology 319
Gm8952 6 72073055 to 72074153 1098 - pseudogene predicted gene 8952
Gm44604 6 72087359 to 72087854 495 - pseudogene predicted gene 44604
Cpgi17533 6 72097206 to 72098446 1240 CpG island CpG island 17533
Tssr57052 6 72097344 to 72097357 13 + TSS region transcription start site region 57052
Tssr57053 6 72097374 to 72097386 12 + TSS region transcription start site region 57053
Tssr57054 6 72097403 to 72097418 15 + TSS region transcription start site region 57054
Tssr57055 6 72097561 to 72097630 69 + TSS region transcription start site region 57055
St3gal5 6 72097592 to 72154571 56979 + protein coding gene ST3 beta-galactoside alpha-2,3-sialyltransferase 5
Tssr57056 6 72097702 to 72097713 11 + TSS region transcription start site region 57056
Tssr57057 6 72097731 to 72097751 20 + TSS region transcription start site region 57057
Tssr57058 6 72097763 to 72097785 22 + TSS region transcription start site region 57058
Tssr57059 6 72097795 to 72097806 11 + TSS region transcription start site region 57059
Tssr57060 6 72097823 to 72097834 11 + TSS region transcription start site region 57060
Tssr57061 6 72098814 to 72098823 9 + TSS region transcription start site region 57061
Tssr57062 6 72099929 to 72099939 10 + TSS region transcription start site region 57062
Tssr57063 6 72104201 to 72104206 5 + TSS region transcription start site region 57063
Gm29438 6 72104201 to 72106813 2612 + sense intronic lncRNA gene predicted gene 29438
Tssr1885 6 72109785 to 72109796 11 + TSS region transcription start site region 1885