Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:71861145-72063775

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Immt 6 71831090 to 71875266 44176 + protein coding gene inner membrane protein, mitochondrial
Gm17825 6 71869212 to 71870005 793 - pseudogene predicted gene, 17825
Ptcd3 6 71880638 to 71908750 28112 - protein coding gene pentatricopeptide repeat domain 3
Tssr61401 6 71881169 to 71881171 2 - TSS region transcription start site region 61401
Gm22486 6 71882557 to 71882693 136 - snoRNA gene predicted gene, 22486
Tssr61402 6 71888782 to 71888783 1 - TSS region transcription start site region 61402
Cpgi17532 6 71908471 to 71909263 792 CpG island CpG island 17532
Tssr61403 6 71908736 to 71908770 34 - TSS region transcription start site region 61403
Tssr57047 6 71909036 to 71909043 7 + TSS region transcription start site region 57047
Tssr57048 6 71909046 to 71909076 30 + TSS region transcription start site region 57048
Polr1a 6 71909053 to 71979435 70382 + protein coding gene polymerase (RNA) I polypeptide A
Tssr57049 6 71912234 to 71912252 18 + TSS region transcription start site region 57049
Gm19078 6 71918901 to 71919844 943 - pseudogene predicted gene, 19078
Tssr57050 6 71926079 to 71926110 31 + TSS region transcription start site region 57050
Tssr57051 6 71936008 to 71936040 32 + TSS region transcription start site region 57051
Gm26628 6 71961145 to 71963775 2630 - antisense lncRNA gene predicted gene, 26628
Tssr61404 6 72010163 to 72010166 3 - TSS region transcription start site region 61404
9130221F21Rik 6 72013896 to 72042528 28632 - lincRNA gene RIKEN cDNA 9130221F21 gene
Tssr61405 6 72042517 to 72042533 16 - TSS region transcription start site region 61405
Tssr61406 6 72042537 to 72042540 3 - TSS region transcription start site region 61406
Tssr61407 6 72042544 to 72042560 16 - TSS region transcription start site region 61407
Tssr61408 6 72042569 to 72042572 3 - TSS region transcription start site region 61408
D6Mit319 6 72059944 to 72060063 119 DNA segment DNA Segment, Chr 6, Massachusetts Institute of Technology 319