MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 6:71141668-71261691

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Thnsl2	6	71128166 to 71144380	16214	-	protein coding gene	threonine synthase-like 2 (bacterial)
Cpgi17520	6	71143748 to 71144444	696		CpG island	CpG island 17520
Tssr61340	6	71144340 to 71144356	16	-	TSS region	transcription start site region 61340
Tssr61341	6	71144363 to 71144381	18	-	TSS region	transcription start site region 61341
Gm30391	6	71148589 to 71153688	5099	+	lncRNA gene	predicted gene, 30391
Gm38827	6	71154105 to 71157968	3863	+	lncRNA gene	predicted gene, 38827
Gm44427	6	71164799 to 71166119	1320	+	lincRNA gene	predicted gene, 44427
Tssr56984	6	71199871 to 71199888	17	+	TSS region	transcription start site region 56984
Fabp1	6	71199888 to 71205023	5135	+	protein coding gene	fatty acid binding protein 1, liver
Tssr56985	6	71201600 to 71201610	10	+	TSS region	transcription start site region 56985
Tssr61342	6	71201668 to 71201691	23	-	TSS region	transcription start site region 61342
Tssr61343	6	71201706 to 71201714	8	-	TSS region	transcription start site region 61343
D6Mit244	6	71203212 to 71203339	127		DNA segment	DNA segment, Chr 6, Massachusetts Institute of Technology 244
Tssr56986	6	71204900 to 71204932	32	+	TSS region	transcription start site region 56986
Smyd1	6	71213940 to 71262281	48341	-	protein coding gene	SET and MYND domain containing 1
Tssr56987	6	71224475 to 71224481	6	+	TSS region	transcription start site region 56987
Tssr61344	6	71225458 to 71225474	16	-	TSS region	transcription start site region 61344
Cpgi17521	6	71239462 to 71239668	206		CpG island	CpG island 17521