Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:71083589-71218688

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cia6c 6 44465871 to 71119467 26653596 QTL collagen induced arthritis QTL 6c
Gm38826 6 71087777 to 71106633 18856 - lncRNA gene predicted gene, 38826
Gm43906 6 71105606 to 71106511 905 - unclassified gene predicted gene, 43906
D6Mit17 6 71119218 to 71119467 249 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 17
Rpl34-ps1 6 71124610 to 71124963 353 + pseudogene ribosomal protein L34, pseudogene 1
Thnsl2 6 71128166 to 71144380 16214 - protein coding gene threonine synthase-like 2 (bacterial)
Cpgi17520 6 71143748 to 71144444 696 CpG island CpG island 17520
Tssr61340 6 71144340 to 71144356 16 - TSS region transcription start site region 61340
Tssr61341 6 71144363 to 71144381 18 - TSS region transcription start site region 61341
Gm30391 6 71148589 to 71153688 5099 + lncRNA gene predicted gene, 30391
Gm38827 6 71154105 to 71157968 3863 + lncRNA gene predicted gene, 38827
Gm44427 6 71164799 to 71166119 1320 + lincRNA gene predicted gene, 44427
Tssr56984 6 71199871 to 71199888 17 + TSS region transcription start site region 56984
Fabp1 6 71199888 to 71205023 5135 + protein coding gene fatty acid binding protein 1, liver
Tssr56985 6 71201600 to 71201610 10 + TSS region transcription start site region 56985
Tssr61342 6 71201668 to 71201691 23 - TSS region transcription start site region 61342
Tssr61343 6 71201706 to 71201714 8 - TSS region transcription start site region 61343
D6Mit244 6 71203212 to 71203339 127 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 244
Tssr56986 6 71204900 to 71204932 32 + TSS region transcription start site region 56986
Smyd1 6 71213940 to 71262281 48341 - protein coding gene SET and MYND domain containing 1