Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Sxbq2 | 6 | 51410089 | QTL | SGC/Knj cross B6 QTL 2 | ||
Trbv4c2 | 6 | 30487875 | QTL | T cell receptor beta variable 4, control 2 | ||
Cia6c | 6 | 26653596 | QTL | collagen induced arthritis QTL 6c | ||
Igk | 6 | 3171118 | + | complex/cluster/region | immunoglobulin kappa chain complex | |
Gm46961 | 6 | 6199 | - | lncRNA gene | predicted gene, 46961 | |
Tssr61320 | 6 | 24 | - | TSS region | transcription start site region 61320 | |
Tssr56947 | 6 | 34 | + | TSS region | transcription start site region 56947 | |
Tssr56948 | 6 | 13 | + | TSS region | transcription start site region 56948 | |
Tssr56949 | 6 | 6 | + | TSS region | transcription start site region 56949 | |
Tssr56950 | 6 | 54 | + | TSS region | transcription start site region 56950 | |
Tssr56951 | 6 | 22 | + | TSS region | transcription start site region 56951 | |
Igkj1 | 6 | 37 | + | gene segment | immunoglobulin kappa joining 1 | |
Tssr56952 | 6 | 13 | + | TSS region | transcription start site region 56952 | |
Igkj2 | 6 | 38 | + | gene segment | immunoglobulin kappa joining 2 | |
Igkj3 | 6 | 37 | + | gene segment | immunoglobulin kappa joining 3 | |
Tssr56953 | 6 | 9 | + | TSS region | transcription start site region 56953 | |
Igkj4 | 6 | 37 | + | gene segment | immunoglobulin kappa joining 4 | |
Tssr56954 | 6 | 19 | + | TSS region | transcription start site region 56954 | |
Tssr56955 | 6 | 26 | + | TSS region | transcription start site region 56955 | |
Igkj5 | 6 | 37 | + | gene segment | immunoglobulin kappa joining 5 | |
Tssr56956 | 6 | 25 | + | TSS region | transcription start site region 56956 | |
Tssr56957 | 6 | 42 | + | TSS region | transcription start site region 56957 | |
Igkc | 6 | 319 | + | gene segment | immunoglobulin kappa constant | |
Tssr56958 | 6 | 11 | + | TSS region | transcription start site region 56958 | |
Tssr61321 | 6 | 27 | - | TSS region | transcription start site region 61321 | |
Tssr56959 | 6 | 11 | + | TSS region | transcription start site region 56959 | |
Tssr56960 | 6 | 3 | + | TSS region | transcription start site region 56960 | |
Tssr56961 | 6 | 5 | + | TSS region | transcription start site region 56961 | |
Tssr56962 | 6 | 9 | + | TSS region | transcription start site region 56962 | |
Tssr56963 | 6 | 7 | + | TSS region | transcription start site region 56963 | |
Tssr56964 | 6 | 3 | + | TSS region | transcription start site region 56964 | |
Tssr56965 | 6 | 9 | + | TSS region | transcription start site region 56965 | |
Tssr56966 | 6 | 6 | + | TSS region | transcription start site region 56966 | |
Tssr56967 | 6 | 11 | + | TSS region | transcription start site region 56967 | |
Tssr61322 | 6 | 10 | - | TSS region | transcription start site region 61322 | |
Tssr56968 | 6 | 17 | + | TSS region | transcription start site region 56968 | |
Tssr61323 | 6 | 76 | - | TSS region | transcription start site region 61323 | |
Tssr56969 | 6 | 5 | + | TSS region | transcription start site region 56969 | |
Tssr56970 | 6 | 11 | + | TSS region | transcription start site region 56970 | |
Tssr56971 | 6 | 3 | + | TSS region | transcription start site region 56971 | |
Tssr61324 | 6 | 63 | - | TSS region | transcription start site region 61324 | |
Tssr56972 | 6 | 36 | + | TSS region | transcription start site region 56972 | |
Tssr56973 | 6 | 9 | + | TSS region | transcription start site region 56973 | |
Tssr61325 | 6 | 30 | - | TSS region | transcription start site region 61325 | |
Tssr56974 | 6 | 7 | + | TSS region | transcription start site region 56974 | |
Tssr1880 | 6 | 1 | + | TSS region | transcription start site region 1880 | |
Tssr61326 | 6 | 8 | - | TSS region | transcription start site region 61326 | |
Tssr56975 | 6 | 11 | + | TSS region | transcription start site region 56975 | |
Tssr61327 | 6 | 20 | - | TSS region | transcription start site region 61327 | |
Tssr61328 | 6 | 7 | - | TSS region | transcription start site region 61328 | |
Gm30211 | 6 | 21314 | + | lincRNA gene | predicted gene, 30211 | |
Tssr61329 | 6 | 11 | - | TSS region | transcription start site region 61329 | |
D6Nds6 | 6 | 200 | DNA segment | DNA segment, Chr 6, Nuffield Department of Surgery 6 | ||
Rpia | 6 | 26455 | - | protein coding gene | ribose 5-phosphate isomerase A | |
Tssr61330 | 6 | 4 | - | TSS region | transcription start site region 61330 | |
Tssr61331 | 6 | 37 | - | TSS region | transcription start site region 61331 | |
Tssr61332 | 6 | 5 | - | TSS region | transcription start site region 61332 | |
Cpgi17513 | 6 | 930 | CpG island | CpG island 17513 | ||
Tssr61333 | 6 | 20 | - | TSS region | transcription start site region 61333 | |
Tssr61334 | 6 | 10 | - | TSS region | transcription start site region 61334 | |
Tssr61335 | 6 | 13 | - | TSS region | transcription start site region 61335 | |
Tssr61336 | 6 | 44 | - | TSS region | transcription start site region 61336 | |
Gm30331 | 6 | 7800 | - | lncRNA gene | predicted gene, 30331 | |
Cpgi17514 | 6 | 295 | CpG island | CpG island 17514 | ||
Tssr56976 | 6 | 49 | + | TSS region | transcription start site region 56976 | |
Cpgi17515 | 6 | 1173 | CpG island | CpG island 17515 | ||
Tssr56977 | 6 | 80 | + | TSS region | transcription start site region 56977 | |
Eif2ak3 | 6 | 60730 | + | protein coding gene | eukaryotic translation initiation factor 2 alpha kinase 3 | |
Tssr56978 | 6 | 11 | + | TSS region | transcription start site region 56978 | |
Tssr56979 | 6 | 2 | + | TSS region | transcription start site region 56979 | |
Gm23346 | 6 | 135 | + | snoRNA gene | predicted gene, 23346 | |
Gm43292 | 6 | 2448 | - | unclassified gene | predicted gene 43292 | |
Tssr56980 | 6 | 7 | + | TSS region | transcription start site region 56980 | |
Tex37 | 6 | 5840 | - | protein coding gene | testis expressed 37 | |
Tssr61337 | 6 | 6 | - | TSS region | transcription start site region 61337 | |
Tssr61338 | 6 | 20 | - | TSS region | transcription start site region 61338 | |
Tssr61339 | 6 | 8 | - | TSS region | transcription start site region 61339 | |
Cpgi17516 | 6 | 1222 | CpG island | CpG island 17516 | ||
Tssr56981 | 6 | 4 | + | TSS region | transcription start site region 56981 | |
Foxi3 | 6 | 4460 | + | protein coding gene | forkhead box I3 | |
Tssr56982 | 6 | 24 | + | TSS region | transcription start site region 56982 | |
Tssr56983 | 6 | 2 | + | TSS region | transcription start site region 56983 | |
Cpgi17517 | 6 | 754 | CpG island | CpG island 17517 | ||
Gm23485 | 6 | 154 | - | snRNA gene | predicted gene, 23485 | |
Cpgi17518 | 6 | 303 | CpG island | CpG island 17518 | ||
Cpgi17519 | 6 | 164 | CpG island | CpG island 17519 | ||
Gm38826 | 6 | 18856 | - | lncRNA gene | predicted gene, 38826 | |
Gm43906 | 6 | 905 | - | unclassified gene | predicted gene, 43906 | |
D6Mit17 | 6 | 249 | DNA segment | DNA segment, Chr 6, Massachusetts Institute of Technology 17 | ||
Rpl34-ps1 | 6 | 353 | + | pseudogene | ribosomal protein L34, pseudogene 1 | |
Thnsl2 | 6 | 16214 | - | protein coding gene | threonine synthase-like 2 (bacterial) | |
Cpgi17520 | 6 | 696 | CpG island | CpG island 17520 | ||
Tssr61340 | 6 | 16 | - | TSS region | transcription start site region 61340 | |
Tssr61341 | 6 | 18 | - | TSS region | transcription start site region 61341 | |
Gm30391 | 6 | 5099 | + | lncRNA gene | predicted gene, 30391 | |
Gm38827 | 6 | 3863 | + | lncRNA gene | predicted gene, 38827 | |
Gm44427 | 6 | 1320 | + | lincRNA gene | predicted gene, 44427 | |
Tssr56984 | 6 | 17 | + | TSS region | transcription start site region 56984 | |
Fabp1 | 6 | 5135 | + | protein coding gene | fatty acid binding protein 1, liver | |
Tssr56985 | 6 | 10 | + | TSS region | transcription start site region 56985 | |
Tssr61342 | 6 | 23 | - | TSS region | transcription start site region 61342 | |
Tssr61343 | 6 | 8 | - | TSS region | transcription start site region 61343 | |
D6Mit244 | 6 | 127 | DNA segment | DNA segment, Chr 6, Massachusetts Institute of Technology 244 | ||
Tssr56986 | 6 | 32 | + | TSS region | transcription start site region 56986 | |
Smyd1 | 6 | 48341 | - | protein coding gene | SET and MYND domain containing 1 | |
Tssr56987 | 6 | 6 | + | TSS region | transcription start site region 56987 | |
Tssr61344 | 6 | 16 | - | TSS region | transcription start site region 61344 | |
Cpgi17521 | 6 | 206 | CpG island | CpG island 17521 | ||
Tssr61345 | 6 | 18 | - | TSS region | transcription start site region 61345 | |
Tssr61346 | 6 | 12 | - | TSS region | transcription start site region 61346 | |
Tssr61347 | 6 | 44 | - | TSS region | transcription start site region 61347 | |
Tssr61348 | 6 | 12 | - | TSS region | transcription start site region 61348 | |
Tssr61349 | 6 | 17 | - | TSS region | transcription start site region 61349 | |
Tssr56988 | 6 | 55 | + | TSS region | transcription start site region 56988 | |
Cpgi17522 | 6 | 916 | CpG island | CpG island 17522 | ||
Tssr61350 | 6 | 31 | - | TSS region | transcription start site region 61350 | |
Tssr56989 | 6 | 31 | + | TSS region | transcription start site region 56989 | |
Mir8112 | 6 | 130 | + | miRNA gene | microRNA 8112 | |
Tssr56990 | 6 | 71 | + | TSS region | transcription start site region 56990 | |
Krcc1 | 6 | 13642 | + | protein coding gene | lysine-rich coiled-coil 1 | |
Gm44321 | 6 | 2854 | + | unclassified gene | predicted gene, 44321 | |
Tssr56991 | 6 | 9 | + | TSS region | transcription start site region 56991 | |
Tssr56992 | 6 | 21 | + | TSS region | transcription start site region 56992 | |
Tssr56993 | 6 | 81 | + | TSS region | transcription start site region 56993 | |
Tssr56994 | 6 | 12 | + | TSS region | transcription start site region 56994 | |
Gm1070 | 6 | 9115 | + | lincRNA gene | predicted gene 1070 | |
Gm38828 | 6 | 10473 | - | lncRNA gene | predicted gene, 38828 | |
Tssr61351 | 6 | 38 | - | TSS region | transcription start site region 61351 | |
Tssr61352 | 6 | 21 | - | TSS region | transcription start site region 61352 | |
Bbaa20 | 6 | 22141472 | QTL | B.burgdorferi-associated arthritis 20 | ||
Etax6 | 6 | 14953098 | QTL | ethanol induced ataxia 6 | ||
D6Mit16 | 6 | 154 | DNA segment | DNA segment, Chr 6, Massachusetts Institute of Technology 16 | ||
Tssr56995 | 6 | 11 | + | TSS region | transcription start site region 56995 | |
Tssr56996 | 6 | 69 | + | TSS region | transcription start site region 56996 | |
Cd8b1 | 6 | 14639 | + | protein coding gene | CD8 antigen, beta chain 1 | |
Tssr1881 | 6 | 10 | + | TSS region | transcription start site region 1881 | |
Tssr56997 | 6 | 9 | + | TSS region | transcription start site region 56997 | |
Tssr56998 | 6 | 20 | + | TSS region | transcription start site region 56998 | |
Tssr56999 | 6 | 5 | + | TSS region | transcription start site region 56999 | |
Tssr57000 | 6 | 18 | + | TSS region | transcription start site region 57000 | |
Tssr57001 | 6 | 11 | + | TSS region | transcription start site region 57001 | |
Tssr57002 | 6 | 21 | + | TSS region | transcription start site region 57002 | |
Tssr57003 | 6 | 13 | + | TSS region | transcription start site region 57003 | |
D6Mit124 | 6 | 189 | DNA segment | DNA segment, Chr 6, Massachusetts Institute of Technology 124 | ||
Tssr57004 | 6 | 18 | + | TSS region | transcription start site region 57004 | |
Gm44110 | 6 | 649 | - | lincRNA gene | predicted gene, 44110 | |
Tssr61353 | 6 | 38 | - | TSS region | transcription start site region 61353 | |
Tssr61354 | 6 | 10 | - | TSS region | transcription start site region 61354 | |
Tssr61355 | 6 | 11 | - | TSS region | transcription start site region 61355 | |
Tssr57005 | 6 | 34 | + | TSS region | transcription start site region 57005 | |
Gm44111 | 6 | 398 | + | pseudogene | predicted gene, 44111 | |
Tssr61356 | 6 | 10 | - | TSS region | transcription start site region 61356 | |
Tssr57006 | 6 | 9 | + | TSS region | transcription start site region 57006 | |
Tssr57007 | 6 | 11 | + | TSS region | transcription start site region 57007 | |
Tssr57008 | 6 | 21 | + | TSS region | transcription start site region 57008 | |
Tssr57009 | 6 | 34 | + | TSS region | transcription start site region 57009 | |
Gm44174 | 6 | 20249 | + | lincRNA gene | predicted gene, 44174 | |
Tssr57010 | 6 | 12 | + | TSS region | transcription start site region 57010 | |
Tssr57011 | 6 | 3 | + | TSS region | transcription start site region 57011 | |
Gm44175 | 6 | 6478 | - | lincRNA gene | predicted gene, 44175 | |
Tssr61357 | 6 | 11 | - | TSS region | transcription start site region 61357 | |
Tssr61358 | 6 | 26 | - | TSS region | transcription start site region 61358 | |
Tssr61359 | 6 | 13 | - | TSS region | transcription start site region 61359 | |
Tssr61360 | 6 | 12 | - | TSS region | transcription start site region 61360 | |
Tssr1882 | 6 | 10 | + | TSS region | transcription start site region 1882 | |
Tssr57012 | 6 | 13 | + | TSS region | transcription start site region 57012 | |
Tssr57013 | 6 | 12 | + | TSS region | transcription start site region 57013 | |
Tssr57014 | 6 | 24 | + | TSS region | transcription start site region 57014 | |
Tssr57015 | 6 | 9 | + | TSS region | transcription start site region 57015 | |
Tssr61361 | 6 | 23 | - | TSS region | transcription start site region 61361 | |
Tssr61362 | 6 | 7 | - | TSS region | transcription start site region 61362 | |
Tssr1883 | 6 | 16 | + | TSS region | transcription start site region 1883 | |
Tssr57016 | 6 | 14 | + | TSS region | transcription start site region 57016 | |
Tssr57017 | 6 | 12 | + | TSS region | transcription start site region 57017 | |
Tssr57018 | 6 | 16 | + | TSS region | transcription start site region 57018 | |
Tssr61363 | 6 | 4 | - | TSS region | transcription start site region 61363 | |
Tssr57019 | 6 | 3 | + | TSS region | transcription start site region 57019 | |
Tssr57020 | 6 | 65 | + | TSS region | transcription start site region 57020 | |
Mclr | 6 | 5744 | QTL | methylcholanthrene lymphoma resistance | ||
Cd8a | 6 | 5744 | + | protein coding gene | CD8 antigen, alpha chain | |
Cpgi17523 | 6 | 220 | CpG island | CpG island 17523 | ||
Tssr57021 | 6 | 10 | + | TSS region | transcription start site region 57021 | |
Tssr57022 | 6 | 90 | + | TSS region | transcription start site region 57022 | |
Tssr57023 | 6 | 14 | + | TSS region | transcription start site region 57023 | |
Tssr57024 | 6 | 14 | + | TSS region | transcription start site region 57024 | |
Tssr57025 | 6 | 24 | + | TSS region | transcription start site region 57025 | |
Tssr57026 | 6 | 9 | + | TSS region | transcription start site region 57026 | |
Tssr57027 | 6 | 16 | + | TSS region | transcription start site region 57027 | |
Rmnd5a | 6 | 52003 | - | protein coding gene | required for meiotic nuclear division 5 homolog A | |
Tssr61364 | 6 | 17 | - | TSS region | transcription start site region 61364 | |
Tssr61365 | 6 | 13 | - | TSS region | transcription start site region 61365 | |
Tssr61366 | 6 | 14 | - | TSS region | transcription start site region 61366 | |
Tssr61367 | 6 | 10 | - | TSS region | transcription start site region 61367 | |
Tssr1884 | 6 | 10 | - | TSS region | transcription start site region 1884 | |
Tssr61368 | 6 | 28 | - | TSS region | transcription start site region 61368 | |
Tssr61369 | 6 | 21 | - | TSS region | transcription start site region 61369 | |
Tssr61370 | 6 | 11 | - | TSS region | transcription start site region 61370 | |
Tssr61371 | 6 | 11 | - | TSS region | transcription start site region 61371 | |
Tssr61372 | 6 | 15 | - | TSS region | transcription start site region 61372 | |
Tssr61373 | 6 | 25 | - | TSS region | transcription start site region 61373 |