Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:70342942-70722944

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56 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Igkv8-18 6 70355877 to 70356445 568 + gene segment immunoglobulin kappa variable 8-18
Gm8848 6 70368458 to 70369800 1342 - pseudogene predicted gene 8848
Tssr56935 6 70371432 to 70371446 14 + TSS region transcription start site region 56935
Igkv6-17 6 70371469 to 70371993 524 + gene segment immunoglobulin kappa variable 6-17
Tssr61314 6 70372627 to 70372635 8 - TSS region transcription start site region 61314
Igkv8-16 6 70386672 to 70387238 566 - gene segment immunoglobulin kappa variable 8-16
Gm42667 6 70405701 to 70405934 233 - pseudogenic gene segment predicted gene 42667
Igkv6-15 6 70406469 to 70406992 523 - gene segment immunoglobulin kappa variable 6-15
Tssr61315 6 70407018 to 70407023 5 - TSS region transcription start site region 61315
Gm8853 6 70408631 to 70409974 1343 + pseudogene predicted gene 8853
Gm10360 6 70424162 to 70424433 271 + pseudogenic gene segment predicted gene 10360
Gm6157 6 70428929 to 70430825 1896 - pseudogene predicted gene 6157
Tssr61316 6 70429968 to 70429981 13 - TSS region transcription start site region 61316
Igkv6-14 6 70434952 to 70435476 524 - gene segment immunoglobulin kappa variable 6-14
Tssr61317 6 70435503 to 70435508 5 - TSS region transcription start site region 61317
Gm8862 6 70437111 to 70438456 1345 + pseudogene predicted gene 8862
Igkv6-13 6 70457503 to 70458036 533 - gene segment immunoglobulin kappa variable 6-13
Tssr61318 6 70458051 to 70458055 4 - TSS region transcription start site region 61318
Gm8872 6 70459665 to 70461005 1340 + pseudogene predicted gene 8872
Gm42720 6 70493364 to 70493663 299 - pseudogenic gene segment predicted gene 42720
Gm42773 6 70495383 to 70495530 147 + pseudogene predicted gene 42773
Igkv3-12-1 6 70497681 to 70498273 592 - pseudogenic gene segment immunoglobulin kappa chain variable 3-12-1
Tssr56936 6 70518201 to 70518209 8 + TSS region transcription start site region 56936
Tssr56937 6 70518240 to 70518252 12 + TSS region transcription start site region 56937
Igkv3-12 6 70518250 to 70518849 599 + gene segment immunoglobulin kappa variable 3-12
Tssr56938 6 70532942 to 70532944 2 + TSS region transcription start site region 56938
Igkv3-11 6 70553239 to 70553862 623 + pseudogenic gene segment immunoglobulin kappa variable 3-11
Tssr56939 6 70572584 to 70572604 20 + TSS region transcription start site region 56939
Igkv3-10 6 70572633 to 70573230 597 + gene segment immunoglobulin kappa variable 3-10
Igkv3-9 6 70588189 to 70588777 588 + gene segment immunoglobulin kappa variable 3-9
Igkv3-8 6 70588875 to 70589452 577 + pseudogenic gene segment immunoglobulin kappa variable 3-8
Tssr56940 6 70607391 to 70607414 23 + TSS region transcription start site region 56940
Igkv3-7 6 70607437 to 70608036 599 + gene segment immunoglobulin kappa variable 3-7
Tssr56941 6 70642363 to 70642385 22 + TSS region transcription start site region 56941
Igkv3-6 6 70642405 to 70642979 574 + pseudogenic gene segment immunoglobulin kappa variable 3-6
Tssr56942 6 70663249 to 70663256 7 + TSS region transcription start site region 56942
Igkv3-5 6 70663298 to 70663895 597 + gene segment immunoglobulin kappa chain variable 3-5
Tssr56943 6 70671759 to 70671787 28 + TSS region transcription start site region 56943
Igkv3-4 6 70671789 to 70672377 588 + gene segment immunoglobulin kappa variable 3-4
Igkv3-3 6 70686946 to 70687534 588 + gene segment immunoglobulin kappa variable 3-3
Tssr56944 6 70698418 to 70698427 9 + TSS region transcription start site region 56944
Tssr56945 6 70698432 to 70698450 18 + TSS region transcription start site region 56945
Igkv3-2 6 70698468 to 70699067 599 + gene segment immunoglobulin kappa variable 3-2
Tssr56946 6 70703531 to 70703555 24 + TSS region transcription start site region 56946
Igkv3-1 6 70703578 to 70704177 599 + gene segment immunoglobulin kappa variable 3-1
Tssr61319 6 70709897 to 70709915 18 - TSS region transcription start site region 61319
Gm46961 6 70713079 to 70719278 6199 - lncRNA gene predicted gene, 46961
Tssr61320 6 70718865 to 70718889 24 - TSS region transcription start site region 61320
Tssr56947 6 70718981 to 70719015 34 + TSS region transcription start site region 56947
Tssr56948 6 70719202 to 70719215 13 + TSS region transcription start site region 56948
Tssr56949 6 70721710 to 70721716 6 + TSS region transcription start site region 56949
Tssr56950 6 70722491 to 70722545 54 + TSS region transcription start site region 56950
Tssr56951 6 70722549 to 70722571 22 + TSS region transcription start site region 56951
Igkj1 6 70722562 to 70722599 37 + gene segment immunoglobulin kappa joining 1
Tssr56952 6 70722838 to 70722851 13 + TSS region transcription start site region 56952
Igkj2 6 70722916 to 70722954 38 + gene segment immunoglobulin kappa joining 2