Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:70132554-70463119

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Igkv6-29 6 70138462 to 70139082 620 - gene segment immunoglobulin kappa chain variable 6-29
Igkv8-28 6 70143593 to 70144161 568 - gene segment immunoglobulin kappa variable 8-28
Gm24096 6 70147936 to 70148045 109 - miRNA gene predicted gene, 24096
Igkv8-27 6 70171809 to 70172270 461 - gene segment immunoglobulin kappa chain variable 8-27
Tssr61310 6 70172289 to 70172306 17 - TSS region transcription start site region 61310
Igkv8-26 6 70193228 to 70193797 569 + gene segment immunoglobulin kappa variable 8-26
Gm8828 6 70209552 to 70213767 4215 - pseudogene predicted gene 8828
Tssr56934 6 70215401 to 70215404 3 + TSS region transcription start site region 56934
Igkv6-25 6 70215433 to 70215957 524 + gene segment immunoglobulin kappa chain variable 6-25
Igkv8-24 6 70216858 to 70217421 563 - gene segment immunoglobulin kappa chain variable 8-24
Tssr61311 6 70217449 to 70217452 3 - TSS region transcription start site region 61311
Gm46962 6 70218846 to 70220704 1858 - lncRNA gene predicted gene, 46962
Igkv8-23-1 6 70240427 to 70240710 283 + gene segment immunoglobulin kappa variable 8-23-1
Gm43218 6 70240427 to 70240972 545 - gene segment predicted gene 43218
Igkv6-23 6 70260409 to 70260933 524 - gene segment immunoglobulin kappa variable 6-23
Tssr61312 6 70260959 to 70260964 5 - TSS region transcription start site region 61312
Gm8836 6 70262565 to 70263912 1347 + pseudogene predicted gene 8836
Gm11065 6 70295177 to 70295406 229 + pseudogene predicted gene 11065
Igkv8-22 6 70297554 to 70298119 565 - pseudogenic gene segment immunoglobulin kappa chain variable 8-22
Igkv8-21 6 70314895 to 70315452 557 - gene segment immunoglobulin kappa variable 8-21
Tssr61313 6 70315467 to 70315473 6 - TSS region transcription start site region 61313
Amd-ps5 6 70327036 to 70328024 988 + pseudogene S-adenosylmethionine decarboxylase, pseudogene 5
Igkv6-20 6 70335841 to 70336479 638 - gene segment immunoglobulin kappa variable 6-20
Igkv8-19 6 70340876 to 70341448 572 - gene segment immunoglobulin kappa variable 8-19
Igkv8-18 6 70355877 to 70356445 568 + gene segment immunoglobulin kappa variable 8-18
Gm8848 6 70368458 to 70369800 1342 - pseudogene predicted gene 8848
Tssr56935 6 70371432 to 70371446 14 + TSS region transcription start site region 56935
Igkv6-17 6 70371469 to 70371993 524 + gene segment immunoglobulin kappa variable 6-17
Tssr61314 6 70372627 to 70372635 8 - TSS region transcription start site region 61314
Igkv8-16 6 70386672 to 70387238 566 - gene segment immunoglobulin kappa variable 8-16
Gm42667 6 70405701 to 70405934 233 - pseudogenic gene segment predicted gene 42667
Igkv6-15 6 70406469 to 70406992 523 - gene segment immunoglobulin kappa variable 6-15
Tssr61315 6 70407018 to 70407023 5 - TSS region transcription start site region 61315
Gm8853 6 70408631 to 70409974 1343 + pseudogene predicted gene 8853
Gm10360 6 70424162 to 70424433 271 + pseudogenic gene segment predicted gene 10360
Gm6157 6 70428929 to 70430825 1896 - pseudogene predicted gene 6157
Tssr61316 6 70429968 to 70429981 13 - TSS region transcription start site region 61316
Igkv6-14 6 70434952 to 70435476 524 - gene segment immunoglobulin kappa variable 6-14
Tssr61317 6 70435503 to 70435508 5 - TSS region transcription start site region 61317
Gm8862 6 70437111 to 70438456 1345 + pseudogene predicted gene 8862
Igkv6-13 6 70457503 to 70458036 533 - gene segment immunoglobulin kappa variable 6-13
Tssr61318 6 70458051 to 70458055 4 - TSS region transcription start site region 61318
Gm8872 6 70459665 to 70461005 1340 + pseudogene predicted gene 8872