Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:68769690-69350224

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58 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
4930549O18Rik 6 68799076 to 68802460 3384 unclassified gene RIKEN cDNA 4930549O18 gene
Igkv4-90 6 68807180 to 68807708 528 - gene segment immunoglobulin kappa chain variable 4-90
Tssr61267 6 68807738 to 68807759 21 - TSS region transcription start site region 61267
Igkv13-89-1 6 68810495 to 68810543 48 + pseudogenic gene segment immunoglobulin kappa chain variable 13-89-1
Gm42924 6 68810669 to 68810853 184 + pseudogenic gene segment predicted gene 42924
Igkv12-89 6 68834846 to 68835307 461 - gene segment immunoglobulin kappa chain variable 12-89
Tssr61268 6 68835330 to 68835336 6 - TSS region transcription start site region 61268
Igkv1-88 6 68862265 to 68863031 766 - gene segment immunoglobulin kappa chain variable 1-88
Tssr61269 6 68863041 to 68863048 7 - TSS region transcription start site region 61269
Gm42539 6 68875428 to 68875823 395 - pseudogenic gene segment predicted gene 42539
Gm42543 6 68880178 to 68880674 496 - gene segment predicted gene 42543
Tssr61270 6 68880693 to 68880713 20 - TSS region transcription start site region 61270
Gm42542 6 68893580 to 68893982 402 - pseudogenic gene segment predicted gene 42542
Igkv13-87 6 68902981 to 68903266 285 + pseudogenic gene segment immunoglobulin kappa variable 13-87
Gm43710 6 68909406 to 68909857 451 + pseudogene predicted gene 43710
Igkv4-86 6 68910411 to 68910938 527 - gene segment immunoglobulin kappa variable 4-86
Tssr61271 6 68910443 to 68910457 14 - TSS region transcription start site region 61271
Tssr61272 6 68910948 to 68910962 14 - TSS region transcription start site region 61272
Tssr61273 6 68910980 to 68910998 18 - TSS region transcription start site region 61273
Igkv13-85 6 68930269 to 68930734 465 - gene segment immunoglobulin kappa chain variable 13-85
Tssr61274 6 68930757 to 68930781 24 - TSS region transcription start site region 61274
Tssr56931 6 68939556 to 68939585 29 + TSS region transcription start site region 56931
Igkv13-84 6 68939602 to 68940067 465 + gene segment immunoglobulin kappa chain variable 13-84
Igkv4-83 6 68961378 to 68962007 629 - pseudogenic gene segment immunoglobulin kappa chain variable 4-83
Igkv13-82 6 68979198 to 68979663 465 + pseudogenic gene segment immunoglobulin kappa chain variable 13-82
Tssr56932 6 68980360 to 68980370 10 + TSS region transcription start site region 56932
Tssr61275 6 68980952 to 68980956 4 - TSS region transcription start site region 61275
Igkv4-81 6 68990758 to 68991294 536 - gene segment immunoglobulin kappa variable 4-81
Tssr61276 6 68991323 to 68991347 24 - TSS region transcription start site region 61276
Igkv13-80-1 6 69009143 to 69009513 370 + pseudogenic gene segment immunoglobulin kappa chain variable 13-80-1
Igkv4-80 6 69016558 to 69017080 522 - gene segment immunoglobulin kappa variable 4-80
Tssr61277 6 69017128 to 69017135 7 - TSS region transcription start site region 61277
Igkv4-79 6 69042972 to 69043505 533 - gene segment immunoglobulin kappa variable 4-79
Tssr61278 6 69043534 to 69043556 22 - TSS region transcription start site region 61278
Igkv13-78-1 6 69051617 to 69051816 199 + pseudogenic gene segment immunoglobulin kappa variable 13-78-1
Igkv4-78 6 69059690 to 69060224 534 - gene segment immunoglobulin kappa variable 4-78
Gm43583 6 69086185 to 69086487 302 + pseudogenic gene segment predicted gene 43583
Igkv4-77 6 69110904 to 69111432 528 - pseudogenic gene segment immunoglobulin kappa variable 4-77
Igkv13-76 6 69137866 to 69138332 466 + pseudogenic gene segment immunoglobulin kappa chain variable 13-76
Igkv4-75 6 69156118 to 69156659 541 - pseudogenic gene segment immunoglobulin kappa chain variable 4-75
Igkv13-74-1 6 69177423 to 69177787 364 + pseudogenic gene segment immunoglobulin kappa chain variable 13-74-1
Igkv4-74 6 69184826 to 69185361 535 - gene segment immunoglobulin kappa variable 4-74
Tssr61279 6 69185408 to 69185416 8 - TSS region transcription start site region 61279
Igkv13-73-1 6 69190083 to 69190282 199 + pseudogenic gene segment immunoglobulin kappa chain variable 13-73-1
Igkv4-73 6 69197583 to 69198116 533 - gene segment immunoglobulin kappa variable 4-73
Tssr61280 6 69198145 to 69198165 20 - TSS region transcription start site region 61280
Igkv4-72 6 69226854 to 69227383 529 - gene segment immunoglobulin kappa chain variable 4-72
Igkv13-71-1 6 69235927 to 69236158 231 + pseudogenic gene segment immunoglobulin kappa chain variable 13-71-1
Igkv4-71 6 69243160 to 69243688 528 - gene segment immunoglobulin kappa chain variable 4-71
Tssr61281 6 69243717 to 69243741 24 - TSS region transcription start site region 61281
Igkv4-70 6 69267888 to 69268412 524 - gene segment immunoglobulin kappa chain variable 4-70
Igkv4-69 6 69283794 to 69284319 525 - gene segment immunoglobulin kappa variable 4-69
Tssr1875 6 69284334 to 69284350 16 - TSS region transcription start site region 1875
Igkv4-68 6 69304834 to 69305363 529 - gene segment immunoglobulin kappa variable 4-68
Igkv12-67 6 69324177 to 69324646 469 - pseudogenic gene segment immunoglobulin kappa chain variable 12-67
Rprl1 6 69326937 to 69327174 237 - RNase P RNA gene ribonuclease P RNA-like 1
Igkv12-66 6 69334604 to 69335076 472 - pseudogenic gene segment immunoglobulin kappa chain variable 12-66
Igkv4-65 6 69342472 to 69343004 532 - pseudogenic gene segment immunoglobulin kappa chain variable 4-65