Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:68672180-68942708

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr56930 6 68680347 to 68680354 7 + TSS region transcription start site region 56930
Igkv10-95 6 68680379 to 68680848 469 + gene segment immunoglobulin kappa variable 10-95
Igkv10-94 6 68704508 to 68704978 470 - gene segment immunoglobulin kappa variable 10-94
Igkv2-93-1 6 68712925 to 68713508 583 - pseudogenic gene segment immunoglobulin kappa chain variable 2-93-1
Gm40414 6 68734181 to 68734661 480 - pseudogene predicted gene, 40414
Igkv19-93 6 68736297 to 68736764 467 - gene segment immunoglobulin kappa chain variable 19-93
Tssr61262 6 68736784 to 68736800 16 - TSS region transcription start site region 61262
Igkv4-92 6 68755038 to 68755593 555 - gene segment immunoglobulin kappa variable 4-92
Tssr61263 6 68755631 to 68755636 5 - TSS region transcription start site region 61263
Gm42925 6 68763282 to 68763692 410 - pseudogenic gene segment predicted gene 42925
Igkv4-91 6 68768555 to 68769103 548 - gene segment immunoglobulin kappa chain variable 4-91
Tssr61264 6 68768590 to 68768605 15 - TSS region transcription start site region 61264
Tssr61265 6 68769115 to 68769141 26 - TSS region transcription start site region 61265
Tssr61266 6 68769146 to 68769159 13 - TSS region transcription start site region 61266
4930549O18Rik 6 68799076 to 68802460 3384 unclassified gene RIKEN cDNA 4930549O18 gene
Igkv4-90 6 68807180 to 68807708 528 - gene segment immunoglobulin kappa chain variable 4-90
Tssr61267 6 68807738 to 68807759 21 - TSS region transcription start site region 61267
Igkv13-89-1 6 68810495 to 68810543 48 + pseudogenic gene segment immunoglobulin kappa chain variable 13-89-1
Gm42924 6 68810669 to 68810853 184 + pseudogenic gene segment predicted gene 42924
Igkv12-89 6 68834846 to 68835307 461 - gene segment immunoglobulin kappa chain variable 12-89
Tssr61268 6 68835330 to 68835336 6 - TSS region transcription start site region 61268
Igkv1-88 6 68862265 to 68863031 766 - gene segment immunoglobulin kappa chain variable 1-88
Tssr61269 6 68863041 to 68863048 7 - TSS region transcription start site region 61269
Gm42539 6 68875428 to 68875823 395 - pseudogenic gene segment predicted gene 42539
Gm42543 6 68880178 to 68880674 496 - gene segment predicted gene 42543
Tssr61270 6 68880693 to 68880713 20 - TSS region transcription start site region 61270
Gm42542 6 68893580 to 68893982 402 - pseudogenic gene segment predicted gene 42542
Igkv13-87 6 68902981 to 68903266 285 + pseudogenic gene segment immunoglobulin kappa variable 13-87
Gm43710 6 68909406 to 68909857 451 + pseudogene predicted gene 43710
Igkv4-86 6 68910411 to 68910938 527 - gene segment immunoglobulin kappa variable 4-86
Tssr61271 6 68910443 to 68910457 14 - TSS region transcription start site region 61271
Tssr61272 6 68910948 to 68910962 14 - TSS region transcription start site region 61272
Tssr61273 6 68910980 to 68910998 18 - TSS region transcription start site region 61273
Igkv13-85 6 68930269 to 68930734 465 - gene segment immunoglobulin kappa chain variable 13-85
Tssr61274 6 68930757 to 68930781 24 - TSS region transcription start site region 61274
Tssr56931 6 68939556 to 68939585 29 + TSS region transcription start site region 56931
Igkv13-84 6 68939602 to 68940067 465 + gene segment immunoglobulin kappa chain variable 13-84