Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:68246421-68716718

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr56920 6 68256376 to 68256384 8 + TSS region transcription start site region 56920
Igkv14-111 6 68256404 to 68256869 465 + gene segment immunoglobulin kappa variable 14-111
Gm25436 6 68257394 to 68257538 144 - snoRNA gene predicted gene, 25436
Igkv1-110 6 68270527 to 68271265 738 + gene segment immunoglobulin kappa variable 1-110
Tssr56921 6 68282319 to 68282328 9 + TSS region transcription start site region 56921
Gm43007 6 68297002 to 68297292 290 - pseudogene predicted gene 43007
Gm42612 6 68297762 to 68298489 727 + pseudogene predicted gene 42612
Tssr56922 6 68302408 to 68302410 2 + TSS region transcription start site region 56922
Igkv2-109 6 68302439 to 68303158 719 + gene segment immunoglobulin kappa variable 2-109
Igkv1-108 6 68312062 to 68312359 297 + pseudogenic gene segment immunoglobulin kappa variable 1-108
Igkv2-107 6 68326098 to 68326752 654 + pseudogenic gene segment immunoglobulin kappa variable 2-107
Igkv11-106 6 68339527 to 68339995 468 + pseudogenic gene segment immunoglobulin kappa variable 11-106
Igkv2-105 6 68348661 to 68349441 780 + pseudogenic gene segment immunoglobulin kappa chain variable 2-105
Gm5310 6 68387561 to 68389071 1510 - pseudogene predicted gene 5310
D6Dcr15 6 68390833 to 68390934 101 DNA segment DNA Segment, Chr 6, Derry C. Roopenian 15
Tssr56923 6 68425567 to 68425584 17 + TSS region transcription start site region 56923
Igkv16-104 6 68425605 to 68426072 467 + gene segment immunoglobulin kappa variable 16-104
Tssr56924 6 68437417 to 68437452 35 + TSS region transcription start site region 56924
Igkv15-103 6 68437468 to 68437925 457 + gene segment immunoglobulin kappa chain variable 15-103
Tssr56925 6 68437876 to 68437892 16 + TSS region transcription start site region 56925
D6Dcr16 6 68458847 to 68458945 98 DNA segment DNA Segment, Chr 6, Derry C. Roopenian 16
Igkv15-102 6 68466126 to 68466412 286 - pseudogenic gene segment immunoglobulin kappa chain variable 15-102
Tssr56926 6 68474579 to 68474585 6 + TSS region transcription start site region 56926
Igkv20-101-2 6 68474888 to 68475098 210 + gene segment immunoglobulin kappa chain variable 20-101-2
Igkv15-101-1 6 68479316 to 68479573 257 + pseudogenic gene segment immunoglobulin kappa chain variable 15-101-1
Igkv15-101 6 68481421 to 68481718 297 - pseudogenic gene segment immunoglobulin kappa chain variable 15-101
Tssr1874 6 68512417 to 68512420 3 + TSS region transcription start site region 1874
Tssr56927 6 68518981 to 68518997 16 + TSS region transcription start site region 56927
Igkv14-100 6 68519012 to 68519477 465 + gene segment immunoglobulin kappa chain variable 14-100
Gm25833 6 68532744 to 68532876 132 + snoRNA gene predicted gene, 25833
Tssr56928 6 68541619 to 68541632 13 + TSS region transcription start site region 56928
Igkv1-99 6 68541658 to 68542422 764 + gene segment immunoglobulin kappa variable 1-99
Tssr56929 6 68570733 to 68570739 6 + TSS region transcription start site region 56929
Igkv12-98 6 68570763 to 68571235 472 + gene segment immunoglobulin kappa variable 12-98
Igkv15-97 6 68591380 to 68591832 452 + pseudogenic gene segment immunoglobulin kappa chain variable 15-97
Igkv10-96 6 68631965 to 68632430 465 - gene segment immunoglobulin kappa variable 10-96
Igkv2-95-2 6 68647999 to 68648531 532 - pseudogenic gene segment immunoglobulin kappa variable 2-95-2
Igkv2-95-1 6 68670752 to 68671335 583 + pseudogenic gene segment immunoglobulin kappa chain variable
Tssr56930 6 68680347 to 68680354 7 + TSS region transcription start site region 56930
Igkv10-95 6 68680379 to 68680848 469 + gene segment immunoglobulin kappa variable 10-95
Igkv10-94 6 68704508 to 68704978 470 - gene segment immunoglobulin kappa variable 10-94
Igkv2-93-1 6 68712925 to 68713508 583 - pseudogenic gene segment immunoglobulin kappa chain variable 2-93-1