Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:67851369-68281828

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46 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr56911 6 67861130 to 67861139 9 + TSS region transcription start site region 56911
Igkv17-127 6 67861159 to 67861659 500 + gene segment immunoglobulin kappa variable 17-127
Tssr1873 6 67875984 to 67875986 2 + TSS region transcription start site region 1873
Igkv14-126-1 6 67876011 to 67876477 466 + pseudogenic gene segment immunoglobulin kappa chain variable 14-126-1
Gm9729 6 67883346 to 67883610 264 - pseudogene predicted gene 9729
Tssr56912 6 67896151 to 67896152 1 + TSS region transcription start site region 56912
Igkv14-126 6 67896177 to 67896642 465 + pseudogenic gene segment immunoglobulin kappa variable 14-126
Gm25910 6 67897065 to 67897204 139 - snoRNA gene predicted gene, 25910
Tssr56913 6 67913550 to 67913557 7 + TSS region transcription start site region 56913
Igkv11-125 6 67913573 to 67914052 479 + gene segment immunoglobulin kappa variable 11-125
Igkv9-124 6 67942076 to 67942540 464 - gene segment immunoglobulin kappa chain variable 9-124
Tssr61260 6 67942549 to 67942565 16 - TSS region transcription start site region 61260
Igkv9-123 6 67954230 to 67954690 460 - gene segment immunoglobulin kappa variable 9-123
Tssr61261 6 67954708 to 67954716 8 - TSS region transcription start site region 61261
Tssr56914 6 68016707 to 68016714 7 + TSS region transcription start site region 56914
Igkv1-122 6 68016742 to 68017488 746 + gene segment immunoglobulin kappa chain variable 1-122
Tssr56915 6 68036788 to 68036813 25 + TSS region transcription start site region 56915
Igkv17-121 6 68036818 to 68037318 500 + gene segment immunoglobulin kappa variable 17-121
Tssr56916 6 68049957 to 68049964 7 + TSS region transcription start site region 56916
Igkv9-120 6 68049983 to 68050454 471 + gene segment immunoglobulin kappa chain variable 9-120
Igkv9-119 6 68056345 to 68056810 465 + pseudogenic gene segment immunoglobulin kappa chain variable 9-119
Igkv14-118-2 6 68066369 to 68066828 459 + pseudogenic gene segment immunoglobulin kappa chain variable 14-118-2
Igkv14-118-1 6 68082675 to 68083121 446 + pseudogenic gene segment immunoglobulin kappa chain variable 14-118-1
Gm43739 6 68100569 to 68100972 403 + pseudogenic gene segment predicted gene 43739
Gm5309 6 68103089 to 68103433 344 - pseudogene predicted gene 5309
Igkv11-118 6 68105414 to 68105880 466 + pseudogenic gene segment immunoglobulin kappa chain variable 11-118
Igkv1-117 6 68121091 to 68121825 734 + gene segment immunoglobulin kappa variable 1-117
Gm43171 6 68146402 to 68146692 290 - pseudogene predicted gene 43171
Gm43170 6 68147120 to 68147847 727 + pseudogene predicted gene 43170
D6Mit279 6 68148517 to 68148628 111 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 279
Is(In8B2-8B3.1;6C1)1Tshir 6 68148517 to 74207573 6059056 cytogenetic marker Insertion, Chr8 B2-B3.1 into Chr 6C1, Toshihiko Shiroishi 1
Tssr56917 6 68151854 to 68151856 2 + TSS region transcription start site region 56917
Igkv2-116 6 68151885 to 68152617 732 + pseudogenic gene segment immunoglobulin kappa variable 2-116
Igkv1-115 6 68161415 to 68161716 301 + pseudogenic gene segment immunoglobulin kappa variable 1-115
Igkv11-114 6 68164459 to 68164923 464 + pseudogenic gene segment immunoglobulin kappa chain variable
Igkv2-113 6 68178801 to 68179564 763 + pseudogenic gene segment immunoglobulin kappa chain variable 2-113
D6Mit97 6 68179150 to 68179300 150 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 97
Skts11 6 68179150 to 68179300 150 QTL skin tumor susceptibility 11
Gm4873 6 68214051 to 68215253 1202 - pseudogene predicted gene 4873
Tssr56918 6 68219936 to 68219943 7 + TSS region transcription start site region 56918
Tssr56919 6 68219944 to 68219957 13 + TSS region transcription start site region 56919
Igkv2-112 6 68219981 to 68220705 724 + gene segment immunoglobulin kappa variable 2-112
Tssr56920 6 68256376 to 68256384 8 + TSS region transcription start site region 56920
Igkv14-111 6 68256404 to 68256869 465 + gene segment immunoglobulin kappa variable 14-111
Gm25436 6 68257394 to 68257538 144 - snoRNA gene predicted gene, 25436
Igkv1-110 6 68270527 to 68271265 738 + gene segment immunoglobulin kappa variable 1-110