Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:67534251-67935604

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48 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm42889 6 67532489 to 67556204 23715 + lincRNA gene predicted gene 42889
Tacstd2 6 67534062 to 67535796 1734 - protein coding gene tumor-associated calcium signal transducer 2
Cpgi17512 6 67534650 to 67535876 1226 CpG island CpG island 17512
Tssr61255 6 67534730 to 67534745 15 - TSS region transcription start site region 61255
Tssr1872 6 67534772 to 67534781 9 - TSS region transcription start site region 1872
Tssr61256 6 67535194 to 67535226 32 - TSS region transcription start site region 61256
Tssr61257 6 67535685 to 67535697 12 - TSS region transcription start site region 61257
Tssr61258 6 67535783 to 67535802 19 - TSS region transcription start site region 61258
Tssr61259 6 67535828 to 67535870 42 - TSS region transcription start site region 61259
Tssr56904 6 67555579 to 67555595 16 + TSS region transcription start site region 56904
Tssr56905 6 67555597 to 67555612 15 + TSS region transcription start site region 56905
Tssr56906 6 67555630 to 67555635 5 + TSS region transcription start site region 56906
Igk 6 67555636 to 70726754 3171118 + complex/cluster/region immunoglobulin kappa chain complex
Igkv2-137 6 67555636 to 67556216 580 + gene segment immunoglobulin kappa chain variable 2-137
4930515G16Rik 6 67565234 to 67565699 465 - pseudogene RIKEN cDNA 4930515G16 gene
Igkv1-136 6 67594012 to 67594308 296 + pseudogenic gene segment immunoglobulin kappa chain variable 1-136
Tssr56907 6 67609711 to 67609717 6 + TSS region transcription start site region 56907
Igkv1-135 6 67609745 to 67610508 763 + gene segment immunoglobulin kappa variable 1-135
Gm9728 6 67633089 to 67634143 1054 - pseudogene predicted gene 9728
Rpl18a-ps2 6 67641530 to 67641703 173 - pseudogene ribosomal protein L18A, pseudogene 2
Igkv14-134-1 6 67711174 to 67711628 454 - pseudogenic gene segment immunoglobulin kappa chain variable 14-134-1
Gm38573 6 67717742 to 67721436 3694 - lncRNA gene predicted gene, 38573
Igkv17-134 6 67720729 to 67721225 496 - pseudogenic gene segment immunoglobulin kappa chain variable 17-134
Tssr56908 6 67724880 to 67724886 6 + TSS region transcription start site region 56908
Igkv1-133 6 67724914 to 67725661 747 + gene segment immunoglobulin kappa variable 1-133
Gm5308 6 67734251 to 67735604 1353 - pseudogene predicted gene 5308
Rpl18a-ps3 6 67748560 to 67748730 170 - pseudogene ribosomal protein L18A, pseudogene 3
Gm43284 6 67754746 to 67754998 252 + pseudogenic gene segment predicted gene 43284
Tssr56909 6 67759666 to 67759672 6 + TSS region transcription start site region 56909
Igkv1-132 6 67759700 to 67760413 713 + gene segment immunoglobulin kappa variable 1-132
Igkv1-131 6 67766036 to 67766772 736 - gene segment immunoglobulin kappa variable 1-131
Gm18980 6 67778250 to 67779328 1078 - pseudogene predicted gene, 18980
Tssr56910 6 67791023 to 67791027 4 + TSS region transcription start site region 56910
Igkv14-130 6 67791046 to 67791511 465 + gene segment immunoglobulin kappa variable 14-130
Gm22425 6 67792439 to 67792576 137 - snoRNA gene predicted gene, 22425
Gm24911 6 67804375 to 67804510 135 - snoRNA gene predicted gene, 24911
Igkv9-129 6 67839793 to 67840266 473 + gene segment immunoglobulin kappa variable 9-129
Igkv9-128 6 67847409 to 67847874 465 + pseudogenic gene segment immunoglobulin kappa chain variable 9-128
Tssr56911 6 67861130 to 67861139 9 + TSS region transcription start site region 56911
Igkv17-127 6 67861159 to 67861659 500 + gene segment immunoglobulin kappa variable 17-127
Tssr1873 6 67875984 to 67875986 2 + TSS region transcription start site region 1873
Igkv14-126-1 6 67876011 to 67876477 466 + pseudogenic gene segment immunoglobulin kappa chain variable 14-126-1
Gm9729 6 67883346 to 67883610 264 - pseudogene predicted gene 9729
Tssr56912 6 67896151 to 67896152 1 + TSS region transcription start site region 56912
Igkv14-126 6 67896177 to 67896642 465 + pseudogenic gene segment immunoglobulin kappa variable 14-126
Gm25910 6 67897065 to 67897204 139 - snoRNA gene predicted gene, 25910
Tssr56913 6 67913550 to 67913557 7 + TSS region transcription start site region 56913
Igkv11-125 6 67913573 to 67914052 479 + gene segment immunoglobulin kappa variable 11-125